Protein–RNA interactions for Protein: O88413

Tulp3, Tubby-related protein 3, mousemouse

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tulp3O88413 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tulp3O88413 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC18.29■□□□□ 0.52
Tulp3O88413 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.29■□□□□ 0.52
Tulp3O88413 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tulp3O88413 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tulp3O88413 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tulp3O88413 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tulp3O88413 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tulp3O88413 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Tulp3O88413 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tulp3O88413 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.28■□□□□ 0.52
Tulp3O88413 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.28■□□□□ 0.52
Tulp3O88413 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tulp3O88413 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tulp3O88413 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tulp3O88413 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tulp3O88413 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tulp3O88413 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tulp3O88413 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Tulp3O88413 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Tulp3O88413 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Tulp3O88413 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Tulp3O88413 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Tulp3O88413 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Tulp3O88413 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tulp3O88413 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Tulp3O88413 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Tulp3O88413 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tulp3O88413 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tulp3O88413 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tulp3O88413 Gm10232-201ENSMUST00000089221 720 ntBASIC18.26■□□□□ 0.51
Tulp3O88413 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tulp3O88413 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tulp3O88413 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.26■□□□□ 0.51
Tulp3O88413 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tulp3O88413 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tulp3O88413 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.26■□□□□ 0.51
Tulp3O88413 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tulp3O88413 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
Tulp3O88413 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Tulp3O88413 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.25■□□□□ 0.51
Tulp3O88413 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Tulp3O88413 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Tulp3O88413 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tulp3O88413 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tulp3O88413 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tulp3O88413 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Tulp3O88413 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.24■□□□□ 0.51
Tulp3O88413 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tulp3O88413 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tulp3O88413 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tulp3O88413 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Tulp3O88413 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Tulp3O88413 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tulp3O88413 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tulp3O88413 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tulp3O88413 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tulp3O88413 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tulp3O88413 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tulp3O88413 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Tulp3O88413 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tulp3O88413 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Tulp3O88413 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tulp3O88413 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tulp3O88413 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Tulp3O88413 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Tulp3O88413 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
Tulp3O88413 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tulp3O88413 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.23■□□□□ 0.51
Tulp3O88413 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tulp3O88413 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Tulp3O88413 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.23■□□□□ 0.51
Tulp3O88413 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Tulp3O88413 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tulp3O88413 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Tulp3O88413 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Tulp3O88413 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
Tulp3O88413 Gm5921-201ENSMUST00000075898 882 ntBASIC18.22■□□□□ 0.51
Tulp3O88413 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tulp3O88413 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.22■□□□□ 0.51
Tulp3O88413 Cap2-205ENSMUST00000225824 1634 ntBASIC18.22■□□□□ 0.51
Tulp3O88413 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.22■□□□□ 0.51
Tulp3O88413 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tulp3O88413 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Tulp3O88413 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tulp3O88413 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Tulp3O88413 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tulp3O88413 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Tulp3O88413 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.21■□□□□ 0.51
Tulp3O88413 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.21■□□□□ 0.51
Tulp3O88413 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tulp3O88413 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Tulp3O88413 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.21■□□□□ 0.51
Tulp3O88413 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tulp3O88413 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Tulp3O88413 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tulp3O88413 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC18.2■□□□□ 0.5
Tulp3O88413 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tulp3O88413 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tulp3O88413 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms