Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Pdlim1O70400 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.43■□□□□ 0.7
Pdlim1O70400 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pdlim1O70400 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pdlim1O70400 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.43■□□□□ 0.7
Pdlim1O70400 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pdlim1O70400 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pdlim1O70400 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pdlim1O70400 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Pdlim1O70400 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pdlim1O70400 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pdlim1O70400 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.43■□□□□ 0.7
Pdlim1O70400 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pdlim1O70400 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pdlim1O70400 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.42■□□□□ 0.7
Pdlim1O70400 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.42■□□□□ 0.7
Pdlim1O70400 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pdlim1O70400 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pdlim1O70400 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.42■□□□□ 0.7
Pdlim1O70400 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pdlim1O70400 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pdlim1O70400 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pdlim1O70400 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pdlim1O70400 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Pdlim1O70400 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pdlim1O70400 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Pdlim1O70400 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Pdlim1O70400 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pdlim1O70400 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Pdlim1O70400 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pdlim1O70400 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pdlim1O70400 Gm43017-201ENSMUST00000198296 752 ntBASIC19.41■□□□□ 0.7
Pdlim1O70400 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.41■□□□□ 0.7
Pdlim1O70400 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.41■□□□□ 0.7
Pdlim1O70400 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pdlim1O70400 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pdlim1O70400 Serp2-204ENSMUST00000228055 705 ntBASIC19.4■□□□□ 0.7
Pdlim1O70400 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Pdlim1O70400 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pdlim1O70400 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pdlim1O70400 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pdlim1O70400 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Pdlim1O70400 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Pdlim1O70400 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Pdlim1O70400 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.39■□□□□ 0.69
Pdlim1O70400 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pdlim1O70400 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Pdlim1O70400 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pdlim1O70400 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
Pdlim1O70400 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Pdlim1O70400 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pdlim1O70400 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pdlim1O70400 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pdlim1O70400 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
Pdlim1O70400 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.38■□□□□ 0.69
Pdlim1O70400 Gm26833-201ENSMUST00000180899 440 ntBASIC19.38■□□□□ 0.69
Pdlim1O70400 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.38■□□□□ 0.69
Pdlim1O70400 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.38■□□□□ 0.69
Pdlim1O70400 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.38■□□□□ 0.69
Pdlim1O70400 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pdlim1O70400 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pdlim1O70400 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.38■□□□□ 0.69
Pdlim1O70400 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pdlim1O70400 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pdlim1O70400 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pdlim1O70400 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pdlim1O70400 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pdlim1O70400 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pdlim1O70400 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
Pdlim1O70400 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pdlim1O70400 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.37■□□□□ 0.69
Pdlim1O70400 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Pdlim1O70400 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pdlim1O70400 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Pdlim1O70400 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pdlim1O70400 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pdlim1O70400 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.37■□□□□ 0.69
Pdlim1O70400 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.37■□□□□ 0.69
Pdlim1O70400 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pdlim1O70400 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Pdlim1O70400 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pdlim1O70400 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pdlim1O70400 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pdlim1O70400 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pdlim1O70400 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pdlim1O70400 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pdlim1O70400 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pdlim1O70400 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pdlim1O70400 Gm11421-201ENSMUST00000122124 294 ntBASIC19.36■□□□□ 0.69
Pdlim1O70400 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.36■□□□□ 0.69
Pdlim1O70400 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Pdlim1O70400 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Pdlim1O70400 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Pdlim1O70400 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pdlim1O70400 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.35■□□□□ 0.69
Pdlim1O70400 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
Pdlim1O70400 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pdlim1O70400 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pdlim1O70400 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pdlim1O70400 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms