Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rdh5O55240 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.6■□□□□ 0.57
Rdh5O55240 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rdh5O55240 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rdh5O55240 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.59■□□□□ 0.57
Rdh5O55240 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.59■□□□□ 0.57
Rdh5O55240 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Rdh5O55240 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Rdh5O55240 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rdh5O55240 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rdh5O55240 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
Rdh5O55240 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rdh5O55240 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rdh5O55240 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rdh5O55240 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.59■□□□□ 0.57
Rdh5O55240 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rdh5O55240 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rdh5O55240 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Rdh5O55240 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
Rdh5O55240 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rdh5O55240 Gm27454-201ENSMUST00000185090 204 ntBASIC18.58■□□□□ 0.56
Rdh5O55240 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rdh5O55240 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Rdh5O55240 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rdh5O55240 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Rdh5O55240 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rdh5O55240 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rdh5O55240 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
Rdh5O55240 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rdh5O55240 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rdh5O55240 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rdh5O55240 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rdh5O55240 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rdh5O55240 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.57■□□□□ 0.56
Rdh5O55240 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rdh5O55240 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Rdh5O55240 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Rdh5O55240 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rdh5O55240 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rdh5O55240 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rdh5O55240 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rdh5O55240 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rdh5O55240 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rdh5O55240 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rdh5O55240 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rdh5O55240 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rdh5O55240 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rdh5O55240 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rdh5O55240 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
Rdh5O55240 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rdh5O55240 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rdh5O55240 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rdh5O55240 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.55■□□□□ 0.56
Rdh5O55240 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.55■□□□□ 0.56
Rdh5O55240 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.55■□□□□ 0.56
Rdh5O55240 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rdh5O55240 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.55■□□□□ 0.56
Rdh5O55240 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rdh5O55240 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rdh5O55240 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rdh5O55240 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rdh5O55240 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Rdh5O55240 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rdh5O55240 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rdh5O55240 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rdh5O55240 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.54■□□□□ 0.56
Rdh5O55240 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rdh5O55240 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rdh5O55240 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rdh5O55240 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rdh5O55240 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rdh5O55240 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rdh5O55240 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rdh5O55240 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rdh5O55240 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.53■□□□□ 0.56
Rdh5O55240 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.53■□□□□ 0.56
Rdh5O55240 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rdh5O55240 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rdh5O55240 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rdh5O55240 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rdh5O55240 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rdh5O55240 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rdh5O55240 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rdh5O55240 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rdh5O55240 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rdh5O55240 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rdh5O55240 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.52■□□□□ 0.55
Rdh5O55240 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rdh5O55240 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Rdh5O55240 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rdh5O55240 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rdh5O55240 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rdh5O55240 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rdh5O55240 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rdh5O55240 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rdh5O55240 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rdh5O55240 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Rdh5O55240 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rdh5O55240 Gm45417-201ENSMUST00000209533 758 ntBASIC18.51■□□□□ 0.55
Rdh5O55240 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 10.2 ms