Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Cxcl13O55038 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cxcl13O55038 Gm15043-201ENSMUST00000118843 1543 ntBASIC16.68■□□□□ 0.26
Cxcl13O55038 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cxcl13O55038 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cxcl13O55038 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Cxcl13O55038 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cxcl13O55038 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cxcl13O55038 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cxcl13O55038 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cxcl13O55038 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cxcl13O55038 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cxcl13O55038 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cxcl13O55038 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cxcl13O55038 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cxcl13O55038 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cxcl13O55038 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cxcl13O55038 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cxcl13O55038 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cxcl13O55038 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cxcl13O55038 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Cxcl13O55038 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cxcl13O55038 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC16.66■□□□□ 0.26
Cxcl13O55038 AV356131-201ENSMUST00000206201 750 ntBASIC16.66■□□□□ 0.26
Cxcl13O55038 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Cxcl13O55038 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16.66■□□□□ 0.26
Cxcl13O55038 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cxcl13O55038 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cxcl13O55038 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cxcl13O55038 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cxcl13O55038 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cxcl13O55038 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cxcl13O55038 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cxcl13O55038 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC16.66■□□□□ 0.26
Cxcl13O55038 Cdkn3-203ENSMUST00000227149 1952 ntBASIC16.66■□□□□ 0.26
Cxcl13O55038 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cxcl13O55038 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cxcl13O55038 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC16.65■□□□□ 0.26
Cxcl13O55038 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC16.65■□□□□ 0.26
Cxcl13O55038 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cxcl13O55038 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cxcl13O55038 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Cxcl13O55038 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC16.65■□□□□ 0.26
Cxcl13O55038 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC16.65■□□□□ 0.26
Cxcl13O55038 AC152827.1-201ENSMUST00000221143 2189 ntBASIC16.65■□□□□ 0.26
Cxcl13O55038 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Cxcl13O55038 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cxcl13O55038 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cxcl13O55038 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Cxcl13O55038 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Cxcl13O55038 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
Cxcl13O55038 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cxcl13O55038 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC16.64■□□□□ 0.25
Cxcl13O55038 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC16.64■□□□□ 0.25
Cxcl13O55038 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cxcl13O55038 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
Cxcl13O55038 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cxcl13O55038 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cxcl13O55038 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Cxcl13O55038 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cxcl13O55038 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cxcl13O55038 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cxcl13O55038 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cxcl13O55038 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cxcl13O55038 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cxcl13O55038 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cxcl13O55038 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC16.63■□□□□ 0.25
Cxcl13O55038 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cxcl13O55038 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cxcl13O55038 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cxcl13O55038 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC16.63■□□□□ 0.25
Cxcl13O55038 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Cxcl13O55038 Gm42911-201ENSMUST00000199360 1630 ntBASIC16.63■□□□□ 0.25
Cxcl13O55038 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cxcl13O55038 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cxcl13O55038 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cxcl13O55038 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC16.62■□□□□ 0.25
Cxcl13O55038 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC16.62■□□□□ 0.25
Cxcl13O55038 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC16.62■□□□□ 0.25
Cxcl13O55038 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cxcl13O55038 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cxcl13O55038 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Cxcl13O55038 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cxcl13O55038 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC16.62■□□□□ 0.25
Cxcl13O55038 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Cxcl13O55038 AA386476-201ENSMUST00000098781 1665 ntBASIC16.62■□□□□ 0.25
Cxcl13O55038 Reep4-203ENSMUST00000226563 1444 ntBASIC16.62■□□□□ 0.25
Cxcl13O55038 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC16.61■□□□□ 0.25
Cxcl13O55038 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Cxcl13O55038 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Cxcl13O55038 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cxcl13O55038 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cxcl13O55038 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC16.61■□□□□ 0.25
Cxcl13O55038 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cxcl13O55038 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cxcl13O55038 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cxcl13O55038 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cxcl13O55038 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cxcl13O55038 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cxcl13O55038 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms