Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Polr1aO35134 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC30.75■■■□□ 2.51
Polr1aO35134 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC30.75■■■□□ 2.51
Polr1aO35134 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC30.75■■■□□ 2.51
Polr1aO35134 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
Polr1aO35134 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Polr1aO35134 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Polr1aO35134 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Polr1aO35134 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Polr1aO35134 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Polr1aO35134 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC30.74■■■□□ 2.51
Polr1aO35134 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC30.73■■■□□ 2.51
Polr1aO35134 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
Polr1aO35134 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
Polr1aO35134 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Polr1aO35134 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Polr1aO35134 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC30.72■■■□□ 2.51
Polr1aO35134 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC30.72■■■□□ 2.51
Polr1aO35134 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Polr1aO35134 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC30.72■■■□□ 2.51
Polr1aO35134 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC30.71■■■□□ 2.51
Polr1aO35134 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
Polr1aO35134 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
Polr1aO35134 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Polr1aO35134 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC30.71■■■□□ 2.51
Polr1aO35134 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
Polr1aO35134 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC30.7■■■□□ 2.51
Polr1aO35134 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC30.7■■■□□ 2.51
Polr1aO35134 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC30.7■■■□□ 2.51
Polr1aO35134 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
Polr1aO35134 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC30.7■■■□□ 2.5
Polr1aO35134 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC30.7■■■□□ 2.5
Polr1aO35134 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC30.7■■■□□ 2.5
Polr1aO35134 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC30.7■■■□□ 2.5
Polr1aO35134 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
Polr1aO35134 Gm3807-201ENSMUST00000193520 1168 ntBASIC30.7■■■□□ 2.5
Polr1aO35134 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC30.7■■■□□ 2.5
Polr1aO35134 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC30.7■■■□□ 2.5
Polr1aO35134 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC30.7■■■□□ 2.5
Polr1aO35134 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC30.69■■■□□ 2.5
Polr1aO35134 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC30.69■■■□□ 2.5
Polr1aO35134 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC30.69■■■□□ 2.5
Polr1aO35134 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC30.69■■■□□ 2.5
Polr1aO35134 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
Polr1aO35134 Gm15043-201ENSMUST00000118843 1543 ntBASIC30.68■■■□□ 2.5
Polr1aO35134 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC30.68■■■□□ 2.5
Polr1aO35134 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC30.68■■■□□ 2.5
Polr1aO35134 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Polr1aO35134 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC30.68■■■□□ 2.5
Polr1aO35134 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Polr1aO35134 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Polr1aO35134 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC30.67■■■□□ 2.5
Polr1aO35134 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC30.67■■■□□ 2.5
Polr1aO35134 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC30.67■■■□□ 2.5
Polr1aO35134 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC30.67■■■□□ 2.5
Polr1aO35134 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Polr1aO35134 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC30.67■■■□□ 2.5
Polr1aO35134 Gm43909-201ENSMUST00000203443 1876 ntBASIC30.66■■■□□ 2.5
Polr1aO35134 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Polr1aO35134 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Polr1aO35134 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Polr1aO35134 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC30.65■■■□□ 2.5
Polr1aO35134 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC30.65■■■□□ 2.5
Polr1aO35134 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC30.65■■■□□ 2.5
Polr1aO35134 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Polr1aO35134 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC30.65■■■□□ 2.5
Polr1aO35134 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC30.65■■■□□ 2.5
Polr1aO35134 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC30.65■■■□□ 2.5
Polr1aO35134 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC30.65■■■□□ 2.5
Polr1aO35134 AA386476-201ENSMUST00000098781 1665 ntBASIC30.65■■■□□ 2.5
Polr1aO35134 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC30.64■■■□□ 2.5
Polr1aO35134 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC30.64■■■□□ 2.5
Polr1aO35134 Gm6365-201ENSMUST00000054711 744 ntBASIC30.64■■■□□ 2.5
Polr1aO35134 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC30.64■■■□□ 2.5
Polr1aO35134 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC30.64■■■□□ 2.5
Polr1aO35134 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC30.64■■■□□ 2.5
Polr1aO35134 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC30.64■■■□□ 2.5
Polr1aO35134 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Polr1aO35134 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Polr1aO35134 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Polr1aO35134 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC30.63■■■□□ 2.49
Polr1aO35134 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Polr1aO35134 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
Polr1aO35134 Gm32051-202ENSMUST00000197905 2385 ntBASIC30.63■■■□□ 2.49
Polr1aO35134 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC30.63■■■□□ 2.49
Polr1aO35134 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Polr1aO35134 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC30.62■■■□□ 2.49
Polr1aO35134 Gm20049-201ENSMUST00000219950 730 ntBASIC30.62■■■□□ 2.49
Polr1aO35134 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Polr1aO35134 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Polr1aO35134 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC30.62■■■□□ 2.49
Polr1aO35134 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
Polr1aO35134 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Polr1aO35134 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Polr1aO35134 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Polr1aO35134 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC30.61■■■□□ 2.49
Polr1aO35134 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC30.61■■■□□ 2.49
Polr1aO35134 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Polr1aO35134 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC30.61■■■□□ 2.49
Polr1aO35134 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms