Protein–RNA interactions for Protein: J3QPR6

Rfpl4b, MCG1377, mousemouse

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfpl4bJ3QPR6 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Rfpl4bJ3QPR6 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Rfpl4bJ3QPR6 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
Rfpl4bJ3QPR6 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Rfpl4bJ3QPR6 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Rfpl4bJ3QPR6 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
Rfpl4bJ3QPR6 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Rfpl4bJ3QPR6 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Rfpl4bJ3QPR6 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Rfpl4bJ3QPR6 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
Rfpl4bJ3QPR6 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Rfpl4bJ3QPR6 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Rfpl4bJ3QPR6 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
Rfpl4bJ3QPR6 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Rfpl4bJ3QPR6 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Rfpl4bJ3QPR6 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Rfpl4bJ3QPR6 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC22.66■■□□□ 1.22
Rfpl4bJ3QPR6 Gm10653-202ENSMUST00000139570 835 ntBASIC22.66■■□□□ 1.22
Rfpl4bJ3QPR6 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Rfpl4bJ3QPR6 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Rfpl4bJ3QPR6 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
Rfpl4bJ3QPR6 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rfpl4bJ3QPR6 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rfpl4bJ3QPR6 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rfpl4bJ3QPR6 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC22.65■■□□□ 1.22
Rfpl4bJ3QPR6 Gm42555-201ENSMUST00000199304 1039 ntBASIC22.65■■□□□ 1.22
Rfpl4bJ3QPR6 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Rfpl4bJ3QPR6 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
Rfpl4bJ3QPR6 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rfpl4bJ3QPR6 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC22.65■■□□□ 1.22
Rfpl4bJ3QPR6 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC22.64■■□□□ 1.22
Rfpl4bJ3QPR6 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.22
Rfpl4bJ3QPR6 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Rfpl4bJ3QPR6 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Rfpl4bJ3QPR6 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Rfpl4bJ3QPR6 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Rfpl4bJ3QPR6 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC22.64■■□□□ 1.21
Rfpl4bJ3QPR6 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
Rfpl4bJ3QPR6 Gm43006-201ENSMUST00000197702 1602 ntBASIC22.64■■□□□ 1.21
Rfpl4bJ3QPR6 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rfpl4bJ3QPR6 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rfpl4bJ3QPR6 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
Rfpl4bJ3QPR6 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC22.63■■□□□ 1.21
Rfpl4bJ3QPR6 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Rfpl4bJ3QPR6 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
Rfpl4bJ3QPR6 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
Rfpl4bJ3QPR6 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Rfpl4bJ3QPR6 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rfpl4bJ3QPR6 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Rfpl4bJ3QPR6 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rfpl4bJ3QPR6 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Rfpl4bJ3QPR6 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC22.62■■□□□ 1.21
Rfpl4bJ3QPR6 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Rfpl4bJ3QPR6 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC22.62■■□□□ 1.21
Rfpl4bJ3QPR6 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Rfpl4bJ3QPR6 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC22.62■■□□□ 1.21
Rfpl4bJ3QPR6 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Rfpl4bJ3QPR6 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC22.62■■□□□ 1.21
Rfpl4bJ3QPR6 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
Rfpl4bJ3QPR6 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
Rfpl4bJ3QPR6 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Rfpl4bJ3QPR6 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
Rfpl4bJ3QPR6 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Rfpl4bJ3QPR6 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Rfpl4bJ3QPR6 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC22.61■■□□□ 1.21
Rfpl4bJ3QPR6 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC22.61■■□□□ 1.21
Rfpl4bJ3QPR6 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC22.61■■□□□ 1.21
Rfpl4bJ3QPR6 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
Rfpl4bJ3QPR6 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Rfpl4bJ3QPR6 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Rfpl4bJ3QPR6 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC22.61■■□□□ 1.21
Rfpl4bJ3QPR6 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
Rfpl4bJ3QPR6 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
Rfpl4bJ3QPR6 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Rfpl4bJ3QPR6 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Rfpl4bJ3QPR6 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Rfpl4bJ3QPR6 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Rfpl4bJ3QPR6 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC22.6■■□□□ 1.21
Rfpl4bJ3QPR6 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Rfpl4bJ3QPR6 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Rfpl4bJ3QPR6 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Rfpl4bJ3QPR6 Gm4968-201ENSMUST00000071458 858 ntBASIC22.6■■□□□ 1.21
Rfpl4bJ3QPR6 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Rfpl4bJ3QPR6 Snhg20-203ENSMUST00000182811 2153 ntBASIC22.6■■□□□ 1.21
Rfpl4bJ3QPR6 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Rfpl4bJ3QPR6 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Rfpl4bJ3QPR6 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Rfpl4bJ3QPR6 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Rfpl4bJ3QPR6 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Rfpl4bJ3QPR6 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Rfpl4bJ3QPR6 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Rfpl4bJ3QPR6 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Rfpl4bJ3QPR6 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Rfpl4bJ3QPR6 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC22.58■■□□□ 1.21
Rfpl4bJ3QPR6 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC22.58■■□□□ 1.21
Rfpl4bJ3QPR6 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC22.58■■□□□ 1.2
Rfpl4bJ3QPR6 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
Rfpl4bJ3QPR6 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
Rfpl4bJ3QPR6 Gm3807-201ENSMUST00000193520 1168 ntBASIC22.57■■□□□ 1.2
Rfpl4bJ3QPR6 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC22.57■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms