Protein–RNA interactions for Protein: H3BJZ2

Cdhr4, Cadherin-related family member 4, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr4H3BJZ2 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdhr4H3BJZ2 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Cdhr4H3BJZ2 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdhr4H3BJZ2 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdhr4H3BJZ2 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdhr4H3BJZ2 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cdhr4H3BJZ2 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdhr4H3BJZ2 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdhr4H3BJZ2 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdhr4H3BJZ2 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cdhr4H3BJZ2 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Cdhr4H3BJZ2 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.34■□□□□ 0.37
Cdhr4H3BJZ2 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdhr4H3BJZ2 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Cdhr4H3BJZ2 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Cdhr4H3BJZ2 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cdhr4H3BJZ2 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.33■□□□□ 0.36
Cdhr4H3BJZ2 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.33■□□□□ 0.36
Cdhr4H3BJZ2 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.33■□□□□ 0.36
Cdhr4H3BJZ2 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdhr4H3BJZ2 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.33■□□□□ 0.36
Cdhr4H3BJZ2 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdhr4H3BJZ2 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Cdhr4H3BJZ2 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdhr4H3BJZ2 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cdhr4H3BJZ2 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdhr4H3BJZ2 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdhr4H3BJZ2 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdhr4H3BJZ2 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cdhr4H3BJZ2 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
Cdhr4H3BJZ2 Gm11421-201ENSMUST00000122124 294 ntBASIC17.32■□□□□ 0.36
Cdhr4H3BJZ2 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.32■□□□□ 0.36
Cdhr4H3BJZ2 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdhr4H3BJZ2 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdhr4H3BJZ2 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Cdhr4H3BJZ2 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdhr4H3BJZ2 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdhr4H3BJZ2 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Cdhr4H3BJZ2 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Cdhr4H3BJZ2 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdhr4H3BJZ2 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdhr4H3BJZ2 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdhr4H3BJZ2 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Cdhr4H3BJZ2 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdhr4H3BJZ2 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdhr4H3BJZ2 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cdhr4H3BJZ2 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdhr4H3BJZ2 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Cdhr4H3BJZ2 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdhr4H3BJZ2 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdhr4H3BJZ2 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdhr4H3BJZ2 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdhr4H3BJZ2 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdhr4H3BJZ2 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdhr4H3BJZ2 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.3■□□□□ 0.36
Cdhr4H3BJZ2 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cdhr4H3BJZ2 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.3■□□□□ 0.36
Cdhr4H3BJZ2 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.3■□□□□ 0.36
Cdhr4H3BJZ2 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.3■□□□□ 0.36
Cdhr4H3BJZ2 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.3■□□□□ 0.36
Cdhr4H3BJZ2 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.3■□□□□ 0.36
Cdhr4H3BJZ2 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdhr4H3BJZ2 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdhr4H3BJZ2 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Cdhr4H3BJZ2 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdhr4H3BJZ2 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdhr4H3BJZ2 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdhr4H3BJZ2 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdhr4H3BJZ2 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cdhr4H3BJZ2 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cdhr4H3BJZ2 Gm42569-201ENSMUST00000200539 472 ntBASIC17.29■□□□□ 0.36
Cdhr4H3BJZ2 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.29■□□□□ 0.36
Cdhr4H3BJZ2 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.29■□□□□ 0.36
Cdhr4H3BJZ2 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdhr4H3BJZ2 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdhr4H3BJZ2 Gm10493-201ENSMUST00000097270 612 ntBASIC17.29■□□□□ 0.36
Cdhr4H3BJZ2 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.29■□□□□ 0.36
Cdhr4H3BJZ2 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdhr4H3BJZ2 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cdhr4H3BJZ2 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cdhr4H3BJZ2 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdhr4H3BJZ2 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.28■□□□□ 0.36
Cdhr4H3BJZ2 Gm29257-201ENSMUST00000186115 639 ntBASIC17.28■□□□□ 0.36
Cdhr4H3BJZ2 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.28■□□□□ 0.36
Cdhr4H3BJZ2 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.28■□□□□ 0.36
Cdhr4H3BJZ2 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdhr4H3BJZ2 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.28■□□□□ 0.36
Cdhr4H3BJZ2 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdhr4H3BJZ2 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdhr4H3BJZ2 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdhr4H3BJZ2 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Cdhr4H3BJZ2 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdhr4H3BJZ2 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdhr4H3BJZ2 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Cdhr4H3BJZ2 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cdhr4H3BJZ2 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdhr4H3BJZ2 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cdhr4H3BJZ2 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdhr4H3BJZ2 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Cdhr4H3BJZ2 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms