Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Atf6F6VAN0 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Atf6F6VAN0 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Atf6F6VAN0 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Atf6F6VAN0 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Atf6F6VAN0 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Atf6F6VAN0 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Atf6F6VAN0 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Atf6F6VAN0 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Atf6F6VAN0 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Atf6F6VAN0 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Atf6F6VAN0 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Atf6F6VAN0 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Atf6F6VAN0 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Atf6F6VAN0 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.16■□□□□ 0.82
Atf6F6VAN0 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Atf6F6VAN0 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Atf6F6VAN0 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Atf6F6VAN0 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.15■□□□□ 0.82
Atf6F6VAN0 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Atf6F6VAN0 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Atf6F6VAN0 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Atf6F6VAN0 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.14■□□□□ 0.81
Atf6F6VAN0 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.14■□□□□ 0.81
Atf6F6VAN0 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Atf6F6VAN0 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.14■□□□□ 0.81
Atf6F6VAN0 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
Atf6F6VAN0 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.14■□□□□ 0.81
Atf6F6VAN0 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Atf6F6VAN0 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.14■□□□□ 0.81
Atf6F6VAN0 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
Atf6F6VAN0 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.13■□□□□ 0.81
Atf6F6VAN0 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Atf6F6VAN0 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Atf6F6VAN0 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.13■□□□□ 0.81
Atf6F6VAN0 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Atf6F6VAN0 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.13■□□□□ 0.81
Atf6F6VAN0 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Atf6F6VAN0 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Atf6F6VAN0 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Atf6F6VAN0 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Atf6F6VAN0 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Atf6F6VAN0 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Atf6F6VAN0 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Atf6F6VAN0 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.12■□□□□ 0.81
Atf6F6VAN0 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Atf6F6VAN0 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Atf6F6VAN0 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Atf6F6VAN0 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Atf6F6VAN0 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
Atf6F6VAN0 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Atf6F6VAN0 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Atf6F6VAN0 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Atf6F6VAN0 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Atf6F6VAN0 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Atf6F6VAN0 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Atf6F6VAN0 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Atf6F6VAN0 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Atf6F6VAN0 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Atf6F6VAN0 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Atf6F6VAN0 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Atf6F6VAN0 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Atf6F6VAN0 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Atf6F6VAN0 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Atf6F6VAN0 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Atf6F6VAN0 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Atf6F6VAN0 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Atf6F6VAN0 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Atf6F6VAN0 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Atf6F6VAN0 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.1■□□□□ 0.81
Atf6F6VAN0 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Atf6F6VAN0 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
Atf6F6VAN0 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Atf6F6VAN0 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Atf6F6VAN0 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Atf6F6VAN0 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Atf6F6VAN0 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Atf6F6VAN0 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.09■□□□□ 0.81
Atf6F6VAN0 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Atf6F6VAN0 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Atf6F6VAN0 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Atf6F6VAN0 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
Atf6F6VAN0 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Atf6F6VAN0 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.81
Atf6F6VAN0 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.08■□□□□ 0.81
Atf6F6VAN0 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Atf6F6VAN0 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Atf6F6VAN0 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.08■□□□□ 0.81
Atf6F6VAN0 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Atf6F6VAN0 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Atf6F6VAN0 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Atf6F6VAN0 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Atf6F6VAN0 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Atf6F6VAN0 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Atf6F6VAN0 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Atf6F6VAN0 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Atf6F6VAN0 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Atf6F6VAN0 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Atf6F6VAN0 Gm21956-201ENSMUST00000179946 522 ntBASIC20.07■□□□□ 0.8
Atf6F6VAN0 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.07■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms