Protein–RNA interactions for Protein: F6R3J9

Gm8879, Predicted gene 8879, mousemouse

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm8879F6R3J9 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm8879F6R3J9 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm8879F6R3J9 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Gm8879F6R3J9 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm8879F6R3J9 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm8879F6R3J9 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.74■□□□□ 0.59
Gm8879F6R3J9 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.74■□□□□ 0.59
Gm8879F6R3J9 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Gm8879F6R3J9 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm8879F6R3J9 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Gm8879F6R3J9 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.74■□□□□ 0.59
Gm8879F6R3J9 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Gm8879F6R3J9 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm8879F6R3J9 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm8879F6R3J9 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm8879F6R3J9 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Gm8879F6R3J9 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm8879F6R3J9 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm8879F6R3J9 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm8879F6R3J9 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm8879F6R3J9 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
Gm8879F6R3J9 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm8879F6R3J9 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.73■□□□□ 0.59
Gm8879F6R3J9 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Gm8879F6R3J9 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm8879F6R3J9 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Gm8879F6R3J9 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.73■□□□□ 0.59
Gm8879F6R3J9 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gm8879F6R3J9 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gm8879F6R3J9 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Gm8879F6R3J9 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gm8879F6R3J9 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Gm8879F6R3J9 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gm8879F6R3J9 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gm8879F6R3J9 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gm8879F6R3J9 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.72■□□□□ 0.59
Gm8879F6R3J9 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Gm8879F6R3J9 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Gm8879F6R3J9 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.71■□□□□ 0.59
Gm8879F6R3J9 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gm8879F6R3J9 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Gm8879F6R3J9 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gm8879F6R3J9 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Gm8879F6R3J9 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Gm8879F6R3J9 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Gm8879F6R3J9 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Gm8879F6R3J9 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.58
Gm8879F6R3J9 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gm8879F6R3J9 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Gm8879F6R3J9 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gm8879F6R3J9 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Gm8879F6R3J9 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Gm8879F6R3J9 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Gm8879F6R3J9 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gm8879F6R3J9 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gm8879F6R3J9 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Gm8879F6R3J9 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gm8879F6R3J9 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Gm8879F6R3J9 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gm8879F6R3J9 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Gm8879F6R3J9 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gm8879F6R3J9 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gm8879F6R3J9 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gm8879F6R3J9 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Gm8879F6R3J9 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Gm8879F6R3J9 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gm8879F6R3J9 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Gm8879F6R3J9 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Gm8879F6R3J9 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gm8879F6R3J9 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.69■□□□□ 0.58
Gm8879F6R3J9 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gm8879F6R3J9 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.69■□□□□ 0.58
Gm8879F6R3J9 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm8879F6R3J9 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Gm8879F6R3J9 Gm18755-201ENSMUST00000218030 1099 ntBASIC18.68■□□□□ 0.58
Gm8879F6R3J9 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm8879F6R3J9 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
Gm8879F6R3J9 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Gm8879F6R3J9 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm8879F6R3J9 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm8879F6R3J9 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm8879F6R3J9 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Gm8879F6R3J9 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Gm8879F6R3J9 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm8879F6R3J9 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm8879F6R3J9 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm8879F6R3J9 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm8879F6R3J9 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm8879F6R3J9 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Gm8879F6R3J9 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.66■□□□□ 0.58
Gm8879F6R3J9 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm8879F6R3J9 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm8879F6R3J9 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Gm8879F6R3J9 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm8879F6R3J9 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Gm8879F6R3J9 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Gm8879F6R3J9 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm8879F6R3J9 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm8879F6R3J9 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm8879F6R3J9 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms