Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gm3543D3Z235 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Gm3543D3Z235 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gm3543D3Z235 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gm3543D3Z235 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.71■□□□□ 0.42
Gm3543D3Z235 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Gm3543D3Z235 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Gm3543D3Z235 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Gm3543D3Z235 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.7■□□□□ 0.42
Gm3543D3Z235 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.7■□□□□ 0.42
Gm3543D3Z235 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Gm3543D3Z235 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm3543D3Z235 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm3543D3Z235 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm3543D3Z235 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Gm3543D3Z235 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Gm3543D3Z235 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.69■□□□□ 0.42
Gm3543D3Z235 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm3543D3Z235 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm3543D3Z235 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm3543D3Z235 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Gm3543D3Z235 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Gm3543D3Z235 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.69■□□□□ 0.42
Gm3543D3Z235 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm3543D3Z235 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm3543D3Z235 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Gm3543D3Z235 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm3543D3Z235 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Gm3543D3Z235 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm3543D3Z235 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Gm3543D3Z235 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm3543D3Z235 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Gm3543D3Z235 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.68■□□□□ 0.42
Gm3543D3Z235 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Gm3543D3Z235 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm3543D3Z235 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Gm3543D3Z235 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm3543D3Z235 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm3543D3Z235 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Gm3543D3Z235 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Gm3543D3Z235 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Gm3543D3Z235 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm3543D3Z235 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm3543D3Z235 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.67■□□□□ 0.42
Gm3543D3Z235 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm3543D3Z235 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm3543D3Z235 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm3543D3Z235 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Gm3543D3Z235 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm3543D3Z235 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC17.67■□□□□ 0.42
Gm3543D3Z235 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm3543D3Z235 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm3543D3Z235 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm3543D3Z235 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Gm3543D3Z235 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm3543D3Z235 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm3543D3Z235 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.66■□□□□ 0.42
Gm3543D3Z235 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm3543D3Z235 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm3543D3Z235 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm3543D3Z235 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm3543D3Z235 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm3543D3Z235 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm3543D3Z235 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm3543D3Z235 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm3543D3Z235 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Gm3543D3Z235 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm3543D3Z235 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Gm3543D3Z235 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm3543D3Z235 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Gm3543D3Z235 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm3543D3Z235 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm3543D3Z235 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
Gm3543D3Z235 Gm43017-201ENSMUST00000198296 752 ntBASIC17.65■□□□□ 0.42
Gm3543D3Z235 Spcs1-204ENSMUST00000226782 949 ntBASIC17.65■□□□□ 0.42
Gm3543D3Z235 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Gm3543D3Z235 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Gm3543D3Z235 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm3543D3Z235 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm3543D3Z235 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm3543D3Z235 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm3543D3Z235 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.64■□□□□ 0.41
Gm3543D3Z235 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Gm3543D3Z235 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm3543D3Z235 Mir6236-201ENSMUST00000184437 123 ntBASIC17.64■□□□□ 0.41
Gm3543D3Z235 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.64■□□□□ 0.41
Gm3543D3Z235 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm3543D3Z235 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Gm3543D3Z235 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm3543D3Z235 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Gm3543D3Z235 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm3543D3Z235 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Gm3543D3Z235 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Gm3543D3Z235 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.63■□□□□ 0.41
Gm3543D3Z235 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC17.63■□□□□ 0.41
Gm3543D3Z235 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Gm3543D3Z235 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Gm3543D3Z235 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm3543D3Z235 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm3543D3Z235 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms