Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shank1D3YZU1 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shank1D3YZU1 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.62■□□□□ 0.41
Shank1D3YZU1 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
Shank1D3YZU1 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.61■□□□□ 0.41
Shank1D3YZU1 Gm37856-201ENSMUST00000191634 999 ntBASIC17.61■□□□□ 0.41
Shank1D3YZU1 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Shank1D3YZU1 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Shank1D3YZU1 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Shank1D3YZU1 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shank1D3YZU1 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Shank1D3YZU1 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Shank1D3YZU1 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shank1D3YZU1 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
Shank1D3YZU1 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.6■□□□□ 0.41
Shank1D3YZU1 Gm5408-201ENSMUST00000197998 747 ntBASIC17.6■□□□□ 0.41
Shank1D3YZU1 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shank1D3YZU1 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shank1D3YZU1 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shank1D3YZU1 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.6■□□□□ 0.41
Shank1D3YZU1 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shank1D3YZU1 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shank1D3YZU1 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Shank1D3YZU1 Gm13146-201ENSMUST00000118508 780 ntBASIC17.6■□□□□ 0.41
Shank1D3YZU1 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shank1D3YZU1 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
Shank1D3YZU1 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shank1D3YZU1 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC17.59■□□□□ 0.41
Shank1D3YZU1 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.59■□□□□ 0.41
Shank1D3YZU1 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.59■□□□□ 0.41
Shank1D3YZU1 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.59■□□□□ 0.41
Shank1D3YZU1 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shank1D3YZU1 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shank1D3YZU1 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shank1D3YZU1 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.59■□□□□ 0.41
Shank1D3YZU1 Gm6365-201ENSMUST00000054711 744 ntBASIC17.59■□□□□ 0.41
Shank1D3YZU1 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Shank1D3YZU1 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Shank1D3YZU1 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.58■□□□□ 0.41
Shank1D3YZU1 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Shank1D3YZU1 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.58■□□□□ 0.4
Shank1D3YZU1 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.58■□□□□ 0.4
Shank1D3YZU1 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.58■□□□□ 0.4
Shank1D3YZU1 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Shank1D3YZU1 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Shank1D3YZU1 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC17.58■□□□□ 0.4
Shank1D3YZU1 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Shank1D3YZU1 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Shank1D3YZU1 Gm22325-201ENSMUST00000158904 308 ntBASIC17.57■□□□□ 0.4
Shank1D3YZU1 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Shank1D3YZU1 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Shank1D3YZU1 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Shank1D3YZU1 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Shank1D3YZU1 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Shank1D3YZU1 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Shank1D3YZU1 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Shank1D3YZU1 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.57■□□□□ 0.4
Shank1D3YZU1 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Shank1D3YZU1 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.57■□□□□ 0.4
Shank1D3YZU1 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Shank1D3YZU1 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Shank1D3YZU1 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Shank1D3YZU1 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Shank1D3YZU1 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.56■□□□□ 0.4
Shank1D3YZU1 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.56■□□□□ 0.4
Shank1D3YZU1 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.56■□□□□ 0.4
Shank1D3YZU1 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shank1D3YZU1 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shank1D3YZU1 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shank1D3YZU1 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
Shank1D3YZU1 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shank1D3YZU1 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Shank1D3YZU1 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shank1D3YZU1 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Shank1D3YZU1 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shank1D3YZU1 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shank1D3YZU1 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shank1D3YZU1 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shank1D3YZU1 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shank1D3YZU1 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Shank1D3YZU1 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.56■□□□□ 0.4
Shank1D3YZU1 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shank1D3YZU1 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shank1D3YZU1 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shank1D3YZU1 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shank1D3YZU1 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.55■□□□□ 0.4
Shank1D3YZU1 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Shank1D3YZU1 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Shank1D3YZU1 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Shank1D3YZU1 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC17.55■□□□□ 0.4
Shank1D3YZU1 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.55■□□□□ 0.4
Shank1D3YZU1 Gm26524-201ENSMUST00000192339 390 ntBASIC17.55■□□□□ 0.4
Shank1D3YZU1 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Shank1D3YZU1 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shank1D3YZU1 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shank1D3YZU1 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.54■□□□□ 0.4
Shank1D3YZU1 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shank1D3YZU1 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Shank1D3YZU1 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shank1D3YZU1 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms