Protein–RNA interactions for Protein: D3YUK0

Gm3259, Predicted gene 3259, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3259D3YUK0 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm3259D3YUK0 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm3259D3YUK0 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
Gm3259D3YUK0 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gm3259D3YUK0 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Gm3259D3YUK0 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gm3259D3YUK0 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gm3259D3YUK0 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gm3259D3YUK0 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gm3259D3YUK0 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Gm3259D3YUK0 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Gm3259D3YUK0 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.67■□□□□ 0.74
Gm3259D3YUK0 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm3259D3YUK0 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm3259D3YUK0 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm3259D3YUK0 AA386476-201ENSMUST00000098781 1665 ntBASIC19.66■□□□□ 0.74
Gm3259D3YUK0 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm3259D3YUK0 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
Gm3259D3YUK0 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm3259D3YUK0 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm3259D3YUK0 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm3259D3YUK0 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm3259D3YUK0 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm3259D3YUK0 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm3259D3YUK0 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm3259D3YUK0 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm3259D3YUK0 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Gm3259D3YUK0 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm3259D3YUK0 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm3259D3YUK0 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gm3259D3YUK0 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gm3259D3YUK0 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.65■□□□□ 0.74
Gm3259D3YUK0 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Gm3259D3YUK0 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
Gm3259D3YUK0 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gm3259D3YUK0 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Gm3259D3YUK0 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gm3259D3YUK0 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gm3259D3YUK0 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gm3259D3YUK0 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Gm3259D3YUK0 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gm3259D3YUK0 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Gm3259D3YUK0 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.64■□□□□ 0.73
Gm3259D3YUK0 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gm3259D3YUK0 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gm3259D3YUK0 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gm3259D3YUK0 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gm3259D3YUK0 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gm3259D3YUK0 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gm3259D3YUK0 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gm3259D3YUK0 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gm3259D3YUK0 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gm3259D3YUK0 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gm3259D3YUK0 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
Gm3259D3YUK0 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Gm3259D3YUK0 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Gm3259D3YUK0 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.63■□□□□ 0.73
Gm3259D3YUK0 Gm13241-201ENSMUST00000094493 780 ntBASIC19.63■□□□□ 0.73
Gm3259D3YUK0 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.63■□□□□ 0.73
Gm3259D3YUK0 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Gm3259D3YUK0 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.62■□□□□ 0.73
Gm3259D3YUK0 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gm3259D3YUK0 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gm3259D3YUK0 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Gm3259D3YUK0 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gm3259D3YUK0 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Gm3259D3YUK0 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gm3259D3YUK0 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gm3259D3YUK0 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gm3259D3YUK0 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Gm3259D3YUK0 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gm3259D3YUK0 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gm3259D3YUK0 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Gm3259D3YUK0 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Gm3259D3YUK0 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.61■□□□□ 0.73
Gm3259D3YUK0 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Gm3259D3YUK0 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gm3259D3YUK0 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gm3259D3YUK0 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gm3259D3YUK0 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
Gm3259D3YUK0 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gm3259D3YUK0 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gm3259D3YUK0 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gm3259D3YUK0 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.6■□□□□ 0.73
Gm3259D3YUK0 Gm21956-201ENSMUST00000179946 522 ntBASIC19.6■□□□□ 0.73
Gm3259D3YUK0 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.6■□□□□ 0.73
Gm3259D3YUK0 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.6■□□□□ 0.73
Gm3259D3YUK0 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gm3259D3YUK0 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gm3259D3YUK0 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.6■□□□□ 0.73
Gm3259D3YUK0 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Gm3259D3YUK0 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gm3259D3YUK0 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gm3259D3YUK0 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gm3259D3YUK0 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gm3259D3YUK0 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gm3259D3YUK0 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gm3259D3YUK0 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gm3259D3YUK0 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Gm3259D3YUK0 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.58■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms