Protein–RNA interactions for Protein: B9EKX1

Ptchd4, Patched domain-containing protein 4, mousemouse

Predictions only

Length 904 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd4B9EKX1 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ptchd4B9EKX1 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ptchd4B9EKX1 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC21.23■□□□□ 0.99
Ptchd4B9EKX1 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ptchd4B9EKX1 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ptchd4B9EKX1 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Ptchd4B9EKX1 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ptchd4B9EKX1 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Ptchd4B9EKX1 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ptchd4B9EKX1 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC21.22■□□□□ 0.99
Ptchd4B9EKX1 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ptchd4B9EKX1 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ptchd4B9EKX1 Gm42911-201ENSMUST00000199360 1630 ntBASIC21.22■□□□□ 0.99
Ptchd4B9EKX1 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ptchd4B9EKX1 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ptchd4B9EKX1 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ptchd4B9EKX1 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Ptchd4B9EKX1 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ptchd4B9EKX1 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ptchd4B9EKX1 Spcs1-207ENSMUST00000228767 1008 ntBASIC21.21■□□□□ 0.99
Ptchd4B9EKX1 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ptchd4B9EKX1 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Ptchd4B9EKX1 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ptchd4B9EKX1 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ptchd4B9EKX1 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
Ptchd4B9EKX1 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ptchd4B9EKX1 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.2■□□□□ 0.98
Ptchd4B9EKX1 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ptchd4B9EKX1 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC21.2■□□□□ 0.98
Ptchd4B9EKX1 Ap3s1-204ENSMUST00000225520 957 ntBASIC21.2■□□□□ 0.98
Ptchd4B9EKX1 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ptchd4B9EKX1 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
Ptchd4B9EKX1 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ptchd4B9EKX1 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ptchd4B9EKX1 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Ptchd4B9EKX1 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
Ptchd4B9EKX1 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ptchd4B9EKX1 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ptchd4B9EKX1 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Ptchd4B9EKX1 CT030146.1-201ENSMUST00000220919 217 ntBASIC21.19■□□□□ 0.98
Ptchd4B9EKX1 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ptchd4B9EKX1 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ptchd4B9EKX1 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ptchd4B9EKX1 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ptchd4B9EKX1 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC21.19■□□□□ 0.98
Ptchd4B9EKX1 Gm37035-201ENSMUST00000194809 2148 ntBASIC21.19■□□□□ 0.98
Ptchd4B9EKX1 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ptchd4B9EKX1 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ptchd4B9EKX1 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ptchd4B9EKX1 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Ptchd4B9EKX1 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ptchd4B9EKX1 Gm15043-201ENSMUST00000118843 1543 ntBASIC21.18■□□□□ 0.98
Ptchd4B9EKX1 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC21.18■□□□□ 0.98
Ptchd4B9EKX1 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ptchd4B9EKX1 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.17■□□□□ 0.98
Ptchd4B9EKX1 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ptchd4B9EKX1 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.17■□□□□ 0.98
Ptchd4B9EKX1 Gm12933-201ENSMUST00000120203 872 ntBASIC21.17■□□□□ 0.98
Ptchd4B9EKX1 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC21.17■□□□□ 0.98
Ptchd4B9EKX1 Gm7514-201ENSMUST00000209475 934 ntBASIC21.17■□□□□ 0.98
Ptchd4B9EKX1 CT025689.6-201ENSMUST00000224991 1104 ntBASIC21.17■□□□□ 0.98
Ptchd4B9EKX1 Cdkn3-203ENSMUST00000227149 1952 ntBASIC21.17■□□□□ 0.98
Ptchd4B9EKX1 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ptchd4B9EKX1 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ptchd4B9EKX1 Snhg20-203ENSMUST00000182811 2153 ntBASIC21.17■□□□□ 0.98
Ptchd4B9EKX1 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ptchd4B9EKX1 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ptchd4B9EKX1 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ptchd4B9EKX1 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ptchd4B9EKX1 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ptchd4B9EKX1 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ptchd4B9EKX1 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ptchd4B9EKX1 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC21.16■□□□□ 0.98
Ptchd4B9EKX1 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC21.16■□□□□ 0.98
Ptchd4B9EKX1 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ptchd4B9EKX1 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ptchd4B9EKX1 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ptchd4B9EKX1 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ptchd4B9EKX1 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ptchd4B9EKX1 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ptchd4B9EKX1 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC21.16■□□□□ 0.98
Ptchd4B9EKX1 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ptchd4B9EKX1 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ptchd4B9EKX1 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC21.15■□□□□ 0.98
Ptchd4B9EKX1 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Ptchd4B9EKX1 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ptchd4B9EKX1 AA386476-201ENSMUST00000098781 1665 ntBASIC21.15■□□□□ 0.98
Ptchd4B9EKX1 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Ptchd4B9EKX1 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ptchd4B9EKX1 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.14■□□□□ 0.98
Ptchd4B9EKX1 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ptchd4B9EKX1 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC21.14■□□□□ 0.97
Ptchd4B9EKX1 AC154266.1-201ENSMUST00000223190 503 ntBASIC21.14■□□□□ 0.97
Ptchd4B9EKX1 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ptchd4B9EKX1 Gm10602-201ENSMUST00000098239 609 ntBASIC21.14■□□□□ 0.97
Ptchd4B9EKX1 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ptchd4B9EKX1 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ptchd4B9EKX1 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.14■□□□□ 0.97
Ptchd4B9EKX1 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC21.13■□□□□ 0.97
Ptchd4B9EKX1 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms