Protein–RNA interactions for Protein: B2RS91

Rrn3, RNA polymerase I-specific transcription initiation factor RRN3, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrn3B2RS91 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rrn3B2RS91 Gm12251-201ENSMUST00000117893 792 ntBASIC19.68■□□□□ 0.74
Rrn3B2RS91 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.68■□□□□ 0.74
Rrn3B2RS91 Gm43173-201ENSMUST00000202246 593 ntBASIC19.68■□□□□ 0.74
Rrn3B2RS91 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.68■□□□□ 0.74
Rrn3B2RS91 Serp2-204ENSMUST00000228055 705 ntBASIC19.68■□□□□ 0.74
Rrn3B2RS91 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rrn3B2RS91 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Rrn3B2RS91 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rrn3B2RS91 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rrn3B2RS91 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rrn3B2RS91 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rrn3B2RS91 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rrn3B2RS91 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rrn3B2RS91 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rrn3B2RS91 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rrn3B2RS91 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.67■□□□□ 0.74
Rrn3B2RS91 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rrn3B2RS91 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.67■□□□□ 0.74
Rrn3B2RS91 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Rrn3B2RS91 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.67■□□□□ 0.74
Rrn3B2RS91 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rrn3B2RS91 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rrn3B2RS91 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Rrn3B2RS91 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rrn3B2RS91 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.67■□□□□ 0.74
Rrn3B2RS91 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rrn3B2RS91 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
Rrn3B2RS91 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Rrn3B2RS91 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rrn3B2RS91 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rrn3B2RS91 Gm43017-201ENSMUST00000198296 752 ntBASIC19.66■□□□□ 0.74
Rrn3B2RS91 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.66■□□□□ 0.74
Rrn3B2RS91 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rrn3B2RS91 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Rrn3B2RS91 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rrn3B2RS91 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rrn3B2RS91 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rrn3B2RS91 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rrn3B2RS91 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rrn3B2RS91 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rrn3B2RS91 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.66■□□□□ 0.74
Rrn3B2RS91 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rrn3B2RS91 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Rrn3B2RS91 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rrn3B2RS91 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rrn3B2RS91 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rrn3B2RS91 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rrn3B2RS91 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rrn3B2RS91 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Rrn3B2RS91 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rrn3B2RS91 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
Rrn3B2RS91 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.65■□□□□ 0.74
Rrn3B2RS91 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rrn3B2RS91 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Rrn3B2RS91 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rrn3B2RS91 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rrn3B2RS91 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rrn3B2RS91 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rrn3B2RS91 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rrn3B2RS91 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rrn3B2RS91 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rrn3B2RS91 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
Rrn3B2RS91 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.64■□□□□ 0.73
Rrn3B2RS91 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rrn3B2RS91 Golph3-202ENSMUST00000226517 2359 ntBASIC19.64■□□□□ 0.73
Rrn3B2RS91 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Rrn3B2RS91 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rrn3B2RS91 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rrn3B2RS91 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rrn3B2RS91 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Rrn3B2RS91 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rrn3B2RS91 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.62■□□□□ 0.73
Rrn3B2RS91 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rrn3B2RS91 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rrn3B2RS91 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.62■□□□□ 0.73
Rrn3B2RS91 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rrn3B2RS91 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rrn3B2RS91 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Rrn3B2RS91 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rrn3B2RS91 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rrn3B2RS91 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rrn3B2RS91 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rrn3B2RS91 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.61■□□□□ 0.73
Rrn3B2RS91 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Rrn3B2RS91 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.61■□□□□ 0.73
Rrn3B2RS91 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rrn3B2RS91 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rrn3B2RS91 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rrn3B2RS91 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.61■□□□□ 0.73
Rrn3B2RS91 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rrn3B2RS91 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rrn3B2RS91 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rrn3B2RS91 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rrn3B2RS91 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.6■□□□□ 0.73
Rrn3B2RS91 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rrn3B2RS91 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rrn3B2RS91 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rrn3B2RS91 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rrn3B2RS91 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms