Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm11127A7VMS2 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Gm11127A7VMS2 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm11127A7VMS2 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm11127A7VMS2 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm11127A7VMS2 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Gm11127A7VMS2 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Gm11127A7VMS2 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm11127A7VMS2 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm11127A7VMS2 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm11127A7VMS2 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm11127A7VMS2 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm11127A7VMS2 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC17.31■□□□□ 0.36
Gm11127A7VMS2 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Gm11127A7VMS2 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm11127A7VMS2 Gm10232-201ENSMUST00000089221 720 ntBASIC17.31■□□□□ 0.36
Gm11127A7VMS2 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm11127A7VMS2 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm11127A7VMS2 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.31■□□□□ 0.36
Gm11127A7VMS2 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Gm11127A7VMS2 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Gm11127A7VMS2 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm11127A7VMS2 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm11127A7VMS2 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm11127A7VMS2 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm11127A7VMS2 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm11127A7VMS2 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.3■□□□□ 0.36
Gm11127A7VMS2 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm11127A7VMS2 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm11127A7VMS2 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17.3■□□□□ 0.36
Gm11127A7VMS2 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Gm11127A7VMS2 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Gm11127A7VMS2 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.3■□□□□ 0.36
Gm11127A7VMS2 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm11127A7VMS2 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Gm11127A7VMS2 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm11127A7VMS2 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm11127A7VMS2 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.29■□□□□ 0.36
Gm11127A7VMS2 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC17.29■□□□□ 0.36
Gm11127A7VMS2 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC17.29■□□□□ 0.36
Gm11127A7VMS2 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm11127A7VMS2 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Gm11127A7VMS2 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm11127A7VMS2 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC17.29■□□□□ 0.36
Gm11127A7VMS2 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm11127A7VMS2 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Gm11127A7VMS2 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm11127A7VMS2 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm11127A7VMS2 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC17.28■□□□□ 0.36
Gm11127A7VMS2 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC17.28■□□□□ 0.36
Gm11127A7VMS2 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm11127A7VMS2 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Gm11127A7VMS2 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm11127A7VMS2 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Gm11127A7VMS2 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm11127A7VMS2 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm11127A7VMS2 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm11127A7VMS2 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm11127A7VMS2 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.28■□□□□ 0.36
Gm11127A7VMS2 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm11127A7VMS2 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm11127A7VMS2 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC17.28■□□□□ 0.36
Gm11127A7VMS2 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm11127A7VMS2 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm11127A7VMS2 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm11127A7VMS2 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Gm11127A7VMS2 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Gm11127A7VMS2 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Gm11127A7VMS2 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Gm11127A7VMS2 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Gm11127A7VMS2 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Gm11127A7VMS2 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Gm11127A7VMS2 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Gm11127A7VMS2 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
Gm11127A7VMS2 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm11127A7VMS2 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm11127A7VMS2 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm11127A7VMS2 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm11127A7VMS2 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Gm11127A7VMS2 Gm10399-202ENSMUST00000202768 748 ntBASIC17.26■□□□□ 0.35
Gm11127A7VMS2 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm11127A7VMS2 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.26■□□□□ 0.35
Gm11127A7VMS2 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm11127A7VMS2 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm11127A7VMS2 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm11127A7VMS2 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Gm11127A7VMS2 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Gm11127A7VMS2 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm11127A7VMS2 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm11127A7VMS2 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm11127A7VMS2 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm11127A7VMS2 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Gm11127A7VMS2 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm11127A7VMS2 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm11127A7VMS2 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
Gm11127A7VMS2 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.25■□□□□ 0.35
Gm11127A7VMS2 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm11127A7VMS2 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC17.25■□□□□ 0.35
Gm11127A7VMS2 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC17.25■□□□□ 0.35
Gm11127A7VMS2 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms