Protein–RNA interactions for Protein: A6H6S0

Herc3, Hect domain and RLD 3, mousemouse

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc3A6H6S0 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Herc3A6H6S0 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Herc3A6H6S0 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Herc3A6H6S0 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Herc3A6H6S0 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Herc3A6H6S0 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Herc3A6H6S0 Gm10209-201ENSMUST00000203397 1607 ntBASIC21.73■■□□□ 1.07
Herc3A6H6S0 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Herc3A6H6S0 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Herc3A6H6S0 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Herc3A6H6S0 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC21.73■■□□□ 1.07
Herc3A6H6S0 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC21.73■■□□□ 1.07
Herc3A6H6S0 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Herc3A6H6S0 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
Herc3A6H6S0 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Herc3A6H6S0 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Herc3A6H6S0 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
Herc3A6H6S0 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Herc3A6H6S0 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Herc3A6H6S0 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Herc3A6H6S0 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Herc3A6H6S0 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Herc3A6H6S0 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Herc3A6H6S0 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC21.72■■□□□ 1.07
Herc3A6H6S0 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Herc3A6H6S0 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC21.72■■□□□ 1.07
Herc3A6H6S0 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Herc3A6H6S0 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC21.71■■□□□ 1.07
Herc3A6H6S0 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Herc3A6H6S0 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Herc3A6H6S0 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Herc3A6H6S0 Gm10616-201ENSMUST00000205285 2127 ntBASIC21.7■■□□□ 1.06
Herc3A6H6S0 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC21.7■■□□□ 1.06
Herc3A6H6S0 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Herc3A6H6S0 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Herc3A6H6S0 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Herc3A6H6S0 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Herc3A6H6S0 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Herc3A6H6S0 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Herc3A6H6S0 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Herc3A6H6S0 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Herc3A6H6S0 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Herc3A6H6S0 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Herc3A6H6S0 Gm21956-201ENSMUST00000179946 522 ntBASIC21.69■■□□□ 1.06
Herc3A6H6S0 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC21.69■■□□□ 1.06
Herc3A6H6S0 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Herc3A6H6S0 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Herc3A6H6S0 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Herc3A6H6S0 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.06
Herc3A6H6S0 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
Herc3A6H6S0 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC21.68■■□□□ 1.06
Herc3A6H6S0 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Herc3A6H6S0 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Herc3A6H6S0 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Herc3A6H6S0 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC21.67■■□□□ 1.06
Herc3A6H6S0 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Herc3A6H6S0 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Herc3A6H6S0 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC21.67■■□□□ 1.06
Herc3A6H6S0 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Herc3A6H6S0 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Herc3A6H6S0 AC154266.1-201ENSMUST00000223190 503 ntBASIC21.67■■□□□ 1.06
Herc3A6H6S0 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Herc3A6H6S0 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Herc3A6H6S0 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Herc3A6H6S0 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Herc3A6H6S0 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Herc3A6H6S0 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Herc3A6H6S0 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.66■■□□□ 1.06
Herc3A6H6S0 Gm13241-201ENSMUST00000094493 780 ntBASIC21.66■■□□□ 1.06
Herc3A6H6S0 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Herc3A6H6S0 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Herc3A6H6S0 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Herc3A6H6S0 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Herc3A6H6S0 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Herc3A6H6S0 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Herc3A6H6S0 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Herc3A6H6S0 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Herc3A6H6S0 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Herc3A6H6S0 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Herc3A6H6S0 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Herc3A6H6S0 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Herc3A6H6S0 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC21.64■■□□□ 1.05
Herc3A6H6S0 Gm43137-201ENSMUST00000198052 594 ntBASIC21.64■■□□□ 1.05
Herc3A6H6S0 AC140930.3-201ENSMUST00000222935 274 ntBASIC21.64■■□□□ 1.05
Herc3A6H6S0 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC21.64■■□□□ 1.05
Herc3A6H6S0 Serp2-204ENSMUST00000228055 705 ntBASIC21.64■■□□□ 1.05
Herc3A6H6S0 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Herc3A6H6S0 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC21.64■■□□□ 1.05
Herc3A6H6S0 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Herc3A6H6S0 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Herc3A6H6S0 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Herc3A6H6S0 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Herc3A6H6S0 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Herc3A6H6S0 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Herc3A6H6S0 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Herc3A6H6S0 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Herc3A6H6S0 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
Herc3A6H6S0 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Herc3A6H6S0 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Herc3A6H6S0 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC21.63■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms