Protein–RNA interactions for Protein: A3KG49

Gm5640, Predicted gene 5640, mousemouse

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5640A3KG49 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Gm5640A3KG49 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Gm5640A3KG49 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Gm5640A3KG49 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
Gm5640A3KG49 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Gm5640A3KG49 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Gm5640A3KG49 Gm27502-201ENSMUST00000183495 199 ntBASIC19.86■□□□□ 0.77
Gm5640A3KG49 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.86■□□□□ 0.77
Gm5640A3KG49 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Gm5640A3KG49 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.85■□□□□ 0.77
Gm5640A3KG49 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gm5640A3KG49 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gm5640A3KG49 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gm5640A3KG49 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gm5640A3KG49 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Gm5640A3KG49 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gm5640A3KG49 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Gm5640A3KG49 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gm5640A3KG49 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Gm5640A3KG49 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Gm5640A3KG49 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gm5640A3KG49 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Gm5640A3KG49 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gm5640A3KG49 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Gm5640A3KG49 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gm5640A3KG49 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gm5640A3KG49 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.84■□□□□ 0.77
Gm5640A3KG49 Mir6538-201ENSMUST00000183713 110 ntBASIC19.84■□□□□ 0.77
Gm5640A3KG49 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Gm5640A3KG49 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Gm5640A3KG49 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gm5640A3KG49 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gm5640A3KG49 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gm5640A3KG49 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gm5640A3KG49 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Gm5640A3KG49 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Gm5640A3KG49 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Gm5640A3KG49 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Gm5640A3KG49 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Gm5640A3KG49 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Gm5640A3KG49 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Gm5640A3KG49 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Gm5640A3KG49 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
Gm5640A3KG49 Gm7332-201ENSMUST00000118351 454 ntBASIC19.83■□□□□ 0.77
Gm5640A3KG49 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Gm5640A3KG49 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Gm5640A3KG49 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.83■□□□□ 0.76
Gm5640A3KG49 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.83■□□□□ 0.76
Gm5640A3KG49 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Gm5640A3KG49 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Gm5640A3KG49 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Gm5640A3KG49 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gm5640A3KG49 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gm5640A3KG49 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gm5640A3KG49 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gm5640A3KG49 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.82■□□□□ 0.76
Gm5640A3KG49 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gm5640A3KG49 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gm5640A3KG49 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gm5640A3KG49 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gm5640A3KG49 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Gm5640A3KG49 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gm5640A3KG49 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gm5640A3KG49 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gm5640A3KG49 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Gm5640A3KG49 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Gm5640A3KG49 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Gm5640A3KG49 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Gm5640A3KG49 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Gm5640A3KG49 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gm5640A3KG49 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gm5640A3KG49 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gm5640A3KG49 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gm5640A3KG49 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.81■□□□□ 0.76
Gm5640A3KG49 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gm5640A3KG49 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Gm5640A3KG49 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gm5640A3KG49 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.8■□□□□ 0.76
Gm5640A3KG49 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.8■□□□□ 0.76
Gm5640A3KG49 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gm5640A3KG49 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.8■□□□□ 0.76
Gm5640A3KG49 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Gm5640A3KG49 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gm5640A3KG49 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.8■□□□□ 0.76
Gm5640A3KG49 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Gm5640A3KG49 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gm5640A3KG49 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gm5640A3KG49 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gm5640A3KG49 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Gm5640A3KG49 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Gm5640A3KG49 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.79■□□□□ 0.76
Gm5640A3KG49 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.79■□□□□ 0.76
Gm5640A3KG49 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gm5640A3KG49 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gm5640A3KG49 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gm5640A3KG49 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gm5640A3KG49 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gm5640A3KG49 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gm5640A3KG49 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Gm5640A3KG49 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms