Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 Gm43799-201ENSMUST00000201845 579 ntBASIC31.79■■■□□ 2.68
Shroom2A2ALU4 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
Shroom2A2ALU4 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Shroom2A2ALU4 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Shroom2A2ALU4 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC31.78■■■□□ 2.68
Shroom2A2ALU4 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
Shroom2A2ALU4 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC31.78■■■□□ 2.68
Shroom2A2ALU4 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC31.78■■■□□ 2.68
Shroom2A2ALU4 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Shroom2A2ALU4 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC31.78■■■□□ 2.68
Shroom2A2ALU4 Gm7367-201ENSMUST00000057611 492 ntBASIC31.78■■■□□ 2.68
Shroom2A2ALU4 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC31.78■■■□□ 2.68
Shroom2A2ALU4 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Shroom2A2ALU4 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC31.77■■■□□ 2.68
Shroom2A2ALU4 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC31.77■■■□□ 2.68
Shroom2A2ALU4 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Shroom2A2ALU4 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Shroom2A2ALU4 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Shroom2A2ALU4 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Shroom2A2ALU4 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Shroom2A2ALU4 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
Shroom2A2ALU4 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC31.76■■■□□ 2.67
Shroom2A2ALU4 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
Shroom2A2ALU4 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
Shroom2A2ALU4 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
Shroom2A2ALU4 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC31.75■■■□□ 2.67
Shroom2A2ALU4 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC31.75■■■□□ 2.67
Shroom2A2ALU4 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Shroom2A2ALU4 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC31.75■■■□□ 2.67
Shroom2A2ALU4 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC31.74■■■□□ 2.67
Shroom2A2ALU4 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC31.74■■■□□ 2.67
Shroom2A2ALU4 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC31.74■■■□□ 2.67
Shroom2A2ALU4 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Shroom2A2ALU4 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
Shroom2A2ALU4 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Shroom2A2ALU4 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC31.72■■■□□ 2.67
Shroom2A2ALU4 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC31.72■■■□□ 2.67
Shroom2A2ALU4 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Shroom2A2ALU4 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC31.72■■■□□ 2.67
Shroom2A2ALU4 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC31.72■■■□□ 2.67
Shroom2A2ALU4 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
Shroom2A2ALU4 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Shroom2A2ALU4 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Shroom2A2ALU4 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Shroom2A2ALU4 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Shroom2A2ALU4 Gm38205-201ENSMUST00000192243 258 ntBASIC31.71■■■□□ 2.67
Shroom2A2ALU4 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC31.71■■■□□ 2.67
Shroom2A2ALU4 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
Shroom2A2ALU4 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC31.7■■■□□ 2.66
Shroom2A2ALU4 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC31.7■■■□□ 2.66
Shroom2A2ALU4 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC31.69■■■□□ 2.66
Shroom2A2ALU4 Gm20472-201ENSMUST00000174403 1240 ntBASIC31.69■■■□□ 2.66
Shroom2A2ALU4 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Shroom2A2ALU4 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Shroom2A2ALU4 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Shroom2A2ALU4 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC31.69■■■□□ 2.66
Shroom2A2ALU4 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Shroom2A2ALU4 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
Shroom2A2ALU4 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Shroom2A2ALU4 Gm37563-201ENSMUST00000192580 1513 ntBASIC31.68■■■□□ 2.66
Shroom2A2ALU4 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Shroom2A2ALU4 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC31.68■■■□□ 2.66
Shroom2A2ALU4 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC31.68■■■□□ 2.66
Shroom2A2ALU4 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC31.68■■■□□ 2.66
Shroom2A2ALU4 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
Shroom2A2ALU4 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC31.67■■■□□ 2.66
Shroom2A2ALU4 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
Shroom2A2ALU4 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Shroom2A2ALU4 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC31.66■■■□□ 2.66
Shroom2A2ALU4 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
Shroom2A2ALU4 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC31.66■■■□□ 2.66
Shroom2A2ALU4 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC31.65■■■□□ 2.66
Shroom2A2ALU4 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC31.65■■■□□ 2.66
Shroom2A2ALU4 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC31.65■■■□□ 2.66
Shroom2A2ALU4 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC31.65■■■□□ 2.66
Shroom2A2ALU4 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC31.65■■■□□ 2.66
Shroom2A2ALU4 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Shroom2A2ALU4 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Shroom2A2ALU4 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
Shroom2A2ALU4 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC31.65■■■□□ 2.66
Shroom2A2ALU4 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC31.65■■■□□ 2.66
Shroom2A2ALU4 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC31.65■■■□□ 2.66
Shroom2A2ALU4 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Shroom2A2ALU4 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
Shroom2A2ALU4 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC31.64■■■□□ 2.66
Shroom2A2ALU4 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC31.64■■■□□ 2.66
Shroom2A2ALU4 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC31.64■■■□□ 2.66
Shroom2A2ALU4 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC31.64■■■□□ 2.66
Shroom2A2ALU4 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Shroom2A2ALU4 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.65
Shroom2A2ALU4 Dio3-201ENSMUST00000097228 1449 ntBASIC31.63■■■□□ 2.65
Shroom2A2ALU4 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Shroom2A2ALU4 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC31.63■■■□□ 2.65
Shroom2A2ALU4 Mir5122-201ENSMUST00000175004 89 ntBASIC31.63■■■□□ 2.65
Shroom2A2ALU4 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
Shroom2A2ALU4 Gm18101-201ENSMUST00000215769 548 ntBASIC31.63■■■□□ 2.65
Shroom2A2ALU4 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Shroom2A2ALU4 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC31.62■■■□□ 2.65
Shroom2A2ALU4 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
Shroom2A2ALU4 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms