Protein–RNA interactions for Protein: A0N8N6

Trav12-2, T cell receptor alpha variable 12-2 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-2A0N8N6 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav12-2A0N8N6 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav12-2A0N8N6 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.31■□□□□ 0.36
Trav12-2A0N8N6 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Trav12-2A0N8N6 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav12-2A0N8N6 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav12-2A0N8N6 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC17.3■□□□□ 0.36
Trav12-2A0N8N6 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav12-2A0N8N6 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav12-2A0N8N6 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.3■□□□□ 0.36
Trav12-2A0N8N6 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav12-2A0N8N6 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.3■□□□□ 0.36
Trav12-2A0N8N6 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trav12-2A0N8N6 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav12-2A0N8N6 AA386476-201ENSMUST00000098781 1665 ntBASIC17.29■□□□□ 0.36
Trav12-2A0N8N6 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Trav12-2A0N8N6 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Trav12-2A0N8N6 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav12-2A0N8N6 Golgb1-201ENSMUST00000023534 498 ntBASIC17.29■□□□□ 0.36
Trav12-2A0N8N6 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Trav12-2A0N8N6 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav12-2A0N8N6 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trav12-2A0N8N6 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav12-2A0N8N6 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav12-2A0N8N6 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav12-2A0N8N6 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav12-2A0N8N6 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.29■□□□□ 0.36
Trav12-2A0N8N6 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav12-2A0N8N6 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trav12-2A0N8N6 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC17.28■□□□□ 0.36
Trav12-2A0N8N6 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav12-2A0N8N6 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav12-2A0N8N6 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav12-2A0N8N6 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.28■□□□□ 0.36
Trav12-2A0N8N6 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav12-2A0N8N6 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav12-2A0N8N6 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav12-2A0N8N6 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav12-2A0N8N6 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.27■□□□□ 0.36
Trav12-2A0N8N6 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Trav12-2A0N8N6 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.27■□□□□ 0.36
Trav12-2A0N8N6 Gm12922-201ENSMUST00000120626 809 ntBASIC17.27■□□□□ 0.36
Trav12-2A0N8N6 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC17.27■□□□□ 0.36
Trav12-2A0N8N6 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.27■□□□□ 0.36
Trav12-2A0N8N6 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trav12-2A0N8N6 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Trav12-2A0N8N6 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav12-2A0N8N6 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav12-2A0N8N6 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.26■□□□□ 0.35
Trav12-2A0N8N6 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Trav12-2A0N8N6 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.26■□□□□ 0.35
Trav12-2A0N8N6 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.26■□□□□ 0.35
Trav12-2A0N8N6 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.26■□□□□ 0.35
Trav12-2A0N8N6 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
Trav12-2A0N8N6 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trav12-2A0N8N6 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav12-2A0N8N6 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trav12-2A0N8N6 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav12-2A0N8N6 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav12-2A0N8N6 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav12-2A0N8N6 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav12-2A0N8N6 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav12-2A0N8N6 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trav12-2A0N8N6 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav12-2A0N8N6 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav12-2A0N8N6 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Trav12-2A0N8N6 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Trav12-2A0N8N6 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav12-2A0N8N6 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trav12-2A0N8N6 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav12-2A0N8N6 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav12-2A0N8N6 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav12-2A0N8N6 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav12-2A0N8N6 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC17.24■□□□□ 0.35
Trav12-2A0N8N6 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav12-2A0N8N6 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trav12-2A0N8N6 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav12-2A0N8N6 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav12-2A0N8N6 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trav12-2A0N8N6 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav12-2A0N8N6 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Trav12-2A0N8N6 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav12-2A0N8N6 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav12-2A0N8N6 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav12-2A0N8N6 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav12-2A0N8N6 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav12-2A0N8N6 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav12-2A0N8N6 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trav12-2A0N8N6 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav12-2A0N8N6 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav12-2A0N8N6 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trav12-2A0N8N6 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav12-2A0N8N6 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav12-2A0N8N6 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trav12-2A0N8N6 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.22■□□□□ 0.35
Trav12-2A0N8N6 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trav12-2A0N8N6 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav12-2A0N8N6 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trav12-2A0N8N6 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.21■□□□□ 0.35
Trav12-2A0N8N6 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms