Protein–RNA interactions for Protein: A0A140T8T4

Rpl9-ps6, Ribosomal protein L9, pseudogene 6, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl9-ps6A0A140T8T4 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rpl9-ps6A0A140T8T4 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Rpl9-ps6A0A140T8T4 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rpl9-ps6A0A140T8T4 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Rpl9-ps6A0A140T8T4 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.21■□□□□ 0.83
Rpl9-ps6A0A140T8T4 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Rpl9-ps6A0A140T8T4 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.21■□□□□ 0.83
Rpl9-ps6A0A140T8T4 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.21■□□□□ 0.83
Rpl9-ps6A0A140T8T4 Gm10493-201ENSMUST00000097270 612 ntBASIC20.21■□□□□ 0.83
Rpl9-ps6A0A140T8T4 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rpl9-ps6A0A140T8T4 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Rpl9-ps6A0A140T8T4 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Rpl9-ps6A0A140T8T4 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rpl9-ps6A0A140T8T4 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rpl9-ps6A0A140T8T4 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rpl9-ps6A0A140T8T4 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.2■□□□□ 0.82
Rpl9-ps6A0A140T8T4 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
Rpl9-ps6A0A140T8T4 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rpl9-ps6A0A140T8T4 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rpl9-ps6A0A140T8T4 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rpl9-ps6A0A140T8T4 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rpl9-ps6A0A140T8T4 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rpl9-ps6A0A140T8T4 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Rpl9-ps6A0A140T8T4 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rpl9-ps6A0A140T8T4 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rpl9-ps6A0A140T8T4 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rpl9-ps6A0A140T8T4 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rpl9-ps6A0A140T8T4 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.19■□□□□ 0.82
Rpl9-ps6A0A140T8T4 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.19■□□□□ 0.82
Rpl9-ps6A0A140T8T4 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rpl9-ps6A0A140T8T4 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rpl9-ps6A0A140T8T4 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rpl9-ps6A0A140T8T4 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rpl9-ps6A0A140T8T4 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rpl9-ps6A0A140T8T4 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Rpl9-ps6A0A140T8T4 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rpl9-ps6A0A140T8T4 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rpl9-ps6A0A140T8T4 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rpl9-ps6A0A140T8T4 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Rpl9-ps6A0A140T8T4 Gm27801-201ENSMUST00000184174 223 ntBASIC20.18■□□□□ 0.82
Rpl9-ps6A0A140T8T4 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rpl9-ps6A0A140T8T4 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rpl9-ps6A0A140T8T4 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rpl9-ps6A0A140T8T4 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rpl9-ps6A0A140T8T4 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rpl9-ps6A0A140T8T4 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rpl9-ps6A0A140T8T4 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rpl9-ps6A0A140T8T4 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.17■□□□□ 0.82
Rpl9-ps6A0A140T8T4 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rpl9-ps6A0A140T8T4 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
Rpl9-ps6A0A140T8T4 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rpl9-ps6A0A140T8T4 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rpl9-ps6A0A140T8T4 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rpl9-ps6A0A140T8T4 Gm5874-201ENSMUST00000096101 508 ntBASIC20.17■□□□□ 0.82
Rpl9-ps6A0A140T8T4 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rpl9-ps6A0A140T8T4 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rpl9-ps6A0A140T8T4 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rpl9-ps6A0A140T8T4 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rpl9-ps6A0A140T8T4 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rpl9-ps6A0A140T8T4 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rpl9-ps6A0A140T8T4 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rpl9-ps6A0A140T8T4 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rpl9-ps6A0A140T8T4 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Rpl9-ps6A0A140T8T4 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.16■□□□□ 0.82
Rpl9-ps6A0A140T8T4 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rpl9-ps6A0A140T8T4 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.16■□□□□ 0.82
Rpl9-ps6A0A140T8T4 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rpl9-ps6A0A140T8T4 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Rpl9-ps6A0A140T8T4 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rpl9-ps6A0A140T8T4 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rpl9-ps6A0A140T8T4 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Rpl9-ps6A0A140T8T4 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.15■□□□□ 0.82
Rpl9-ps6A0A140T8T4 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rpl9-ps6A0A140T8T4 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rpl9-ps6A0A140T8T4 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rpl9-ps6A0A140T8T4 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Rpl9-ps6A0A140T8T4 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.14■□□□□ 0.81
Rpl9-ps6A0A140T8T4 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rpl9-ps6A0A140T8T4 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rpl9-ps6A0A140T8T4 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rpl9-ps6A0A140T8T4 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rpl9-ps6A0A140T8T4 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rpl9-ps6A0A140T8T4 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rpl9-ps6A0A140T8T4 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rpl9-ps6A0A140T8T4 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rpl9-ps6A0A140T8T4 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Rpl9-ps6A0A140T8T4 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.13■□□□□ 0.81
Rpl9-ps6A0A140T8T4 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rpl9-ps6A0A140T8T4 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rpl9-ps6A0A140T8T4 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.13■□□□□ 0.81
Rpl9-ps6A0A140T8T4 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rpl9-ps6A0A140T8T4 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rpl9-ps6A0A140T8T4 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Rpl9-ps6A0A140T8T4 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rpl9-ps6A0A140T8T4 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rpl9-ps6A0A140T8T4 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.12■□□□□ 0.81
Rpl9-ps6A0A140T8T4 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rpl9-ps6A0A140T8T4 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rpl9-ps6A0A140T8T4 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.12■□□□□ 0.81
Rpl9-ps6A0A140T8T4 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 10.3 ms