Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trbv17A0A140T8P8 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trbv17A0A140T8P8 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trbv17A0A140T8P8 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trbv17A0A140T8P8 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trbv17A0A140T8P8 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Trbv17A0A140T8P8 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trbv17A0A140T8P8 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trbv17A0A140T8P8 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trbv17A0A140T8P8 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trbv17A0A140T8P8 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trbv17A0A140T8P8 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trbv17A0A140T8P8 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trbv17A0A140T8P8 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trbv17A0A140T8P8 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trbv17A0A140T8P8 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trbv17A0A140T8P8 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trbv17A0A140T8P8 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trbv17A0A140T8P8 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trbv17A0A140T8P8 Gm37035-201ENSMUST00000194809 2148 ntBASIC15.01□□□□□ -0.01
Trbv17A0A140T8P8 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trbv17A0A140T8P8 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC15□□□□□ -0.01
Trbv17A0A140T8P8 Gm9207-201ENSMUST00000198773 1115 ntBASIC15□□□□□ -0.01
Trbv17A0A140T8P8 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC15□□□□□ -0.01
Trbv17A0A140T8P8 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trbv17A0A140T8P8 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trbv17A0A140T8P8 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Trbv17A0A140T8P8 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC15□□□□□ -0.01
Trbv17A0A140T8P8 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trbv17A0A140T8P8 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trbv17A0A140T8P8 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trbv17A0A140T8P8 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Trbv17A0A140T8P8 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trbv17A0A140T8P8 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trbv17A0A140T8P8 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trbv17A0A140T8P8 AC152827.1-201ENSMUST00000221143 2189 ntBASIC15□□□□□ -0.01
Trbv17A0A140T8P8 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv17A0A140T8P8 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv17A0A140T8P8 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv17A0A140T8P8 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv17A0A140T8P8 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC14.99□□□□□ -0.01
Trbv17A0A140T8P8 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Trbv17A0A140T8P8 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv17A0A140T8P8 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv17A0A140T8P8 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv17A0A140T8P8 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC14.99□□□□□ -0.01
Trbv17A0A140T8P8 Mir6236-201ENSMUST00000184437 123 ntBASIC14.99□□□□□ -0.01
Trbv17A0A140T8P8 Gm43759-201ENSMUST00000196925 1261 ntBASIC14.99□□□□□ -0.01
Trbv17A0A140T8P8 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv17A0A140T8P8 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv17A0A140T8P8 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv17A0A140T8P8 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC14.99□□□□□ -0.01
Trbv17A0A140T8P8 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv17A0A140T8P8 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv17A0A140T8P8 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv17A0A140T8P8 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv17A0A140T8P8 Gm8770-201ENSMUST00000121113 1109 ntBASIC14.98□□□□□ -0.01
Trbv17A0A140T8P8 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv17A0A140T8P8 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv17A0A140T8P8 AC140930.3-201ENSMUST00000222935 274 ntBASIC14.98□□□□□ -0.01
Trbv17A0A140T8P8 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv17A0A140T8P8 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv17A0A140T8P8 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv17A0A140T8P8 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv17A0A140T8P8 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv17A0A140T8P8 Gm43034-201ENSMUST00000198678 1364 ntBASIC14.98□□□□□ -0.01
Trbv17A0A140T8P8 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv17A0A140T8P8 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv17A0A140T8P8 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv17A0A140T8P8 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Trbv17A0A140T8P8 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC14.97□□□□□ -0.01
Trbv17A0A140T8P8 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv17A0A140T8P8 Gm13241-201ENSMUST00000094493 780 ntBASIC14.97□□□□□ -0.01
Trbv17A0A140T8P8 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv17A0A140T8P8 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv17A0A140T8P8 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv17A0A140T8P8 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv17A0A140T8P8 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv17A0A140T8P8 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv17A0A140T8P8 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv17A0A140T8P8 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv17A0A140T8P8 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv17A0A140T8P8 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv17A0A140T8P8 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Trbv17A0A140T8P8 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv17A0A140T8P8 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Trbv17A0A140T8P8 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv17A0A140T8P8 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trbv17A0A140T8P8 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trbv17A0A140T8P8 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
Trbv17A0A140T8P8 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv17A0A140T8P8 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv17A0A140T8P8 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv17A0A140T8P8 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv17A0A140T8P8 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC14.95□□□□□ -0.02
Trbv17A0A140T8P8 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv17A0A140T8P8 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv17A0A140T8P8 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv17A0A140T8P8 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv17A0A140T8P8 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms