Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc194A0A140LIT1 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.52■□□□□ 0.72
Ccdc194A0A140LIT1 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.52■□□□□ 0.72
Ccdc194A0A140LIT1 Gm9959-201ENSMUST00000068277 390 ntBASIC19.52■□□□□ 0.72
Ccdc194A0A140LIT1 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc194A0A140LIT1 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ccdc194A0A140LIT1 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ccdc194A0A140LIT1 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.52■□□□□ 0.71
Ccdc194A0A140LIT1 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc194A0A140LIT1 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc194A0A140LIT1 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc194A0A140LIT1 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Ccdc194A0A140LIT1 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc194A0A140LIT1 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc194A0A140LIT1 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc194A0A140LIT1 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc194A0A140LIT1 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc194A0A140LIT1 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc194A0A140LIT1 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc194A0A140LIT1 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Ccdc194A0A140LIT1 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc194A0A140LIT1 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc194A0A140LIT1 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.5■□□□□ 0.71
Ccdc194A0A140LIT1 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.5■□□□□ 0.71
Ccdc194A0A140LIT1 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.5■□□□□ 0.71
Ccdc194A0A140LIT1 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc194A0A140LIT1 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc194A0A140LIT1 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc194A0A140LIT1 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc194A0A140LIT1 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.5■□□□□ 0.71
Ccdc194A0A140LIT1 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc194A0A140LIT1 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc194A0A140LIT1 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc194A0A140LIT1 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Ccdc194A0A140LIT1 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc194A0A140LIT1 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
Ccdc194A0A140LIT1 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc194A0A140LIT1 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc194A0A140LIT1 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc194A0A140LIT1 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.49■□□□□ 0.71
Ccdc194A0A140LIT1 Gm22238-201ENSMUST00000175222 88 ntBASIC19.49■□□□□ 0.71
Ccdc194A0A140LIT1 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.49■□□□□ 0.71
Ccdc194A0A140LIT1 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc194A0A140LIT1 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc194A0A140LIT1 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc194A0A140LIT1 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.49■□□□□ 0.71
Ccdc194A0A140LIT1 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc194A0A140LIT1 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Ccdc194A0A140LIT1 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc194A0A140LIT1 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc194A0A140LIT1 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc194A0A140LIT1 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc194A0A140LIT1 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc194A0A140LIT1 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.48■□□□□ 0.71
Ccdc194A0A140LIT1 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc194A0A140LIT1 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Ccdc194A0A140LIT1 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc194A0A140LIT1 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc194A0A140LIT1 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.48■□□□□ 0.71
Ccdc194A0A140LIT1 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc194A0A140LIT1 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc194A0A140LIT1 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Ccdc194A0A140LIT1 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.48■□□□□ 0.71
Ccdc194A0A140LIT1 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc194A0A140LIT1 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc194A0A140LIT1 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc194A0A140LIT1 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc194A0A140LIT1 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Ccdc194A0A140LIT1 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc194A0A140LIT1 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.47■□□□□ 0.71
Ccdc194A0A140LIT1 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc194A0A140LIT1 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc194A0A140LIT1 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc194A0A140LIT1 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc194A0A140LIT1 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc194A0A140LIT1 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.46■□□□□ 0.71
Ccdc194A0A140LIT1 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc194A0A140LIT1 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc194A0A140LIT1 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc194A0A140LIT1 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc194A0A140LIT1 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc194A0A140LIT1 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Ccdc194A0A140LIT1 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc194A0A140LIT1 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
Ccdc194A0A140LIT1 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.45■□□□□ 0.7
Ccdc194A0A140LIT1 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Ccdc194A0A140LIT1 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc194A0A140LIT1 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
Ccdc194A0A140LIT1 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc194A0A140LIT1 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.45■□□□□ 0.7
Ccdc194A0A140LIT1 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.45■□□□□ 0.7
Ccdc194A0A140LIT1 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc194A0A140LIT1 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.45■□□□□ 0.7
Ccdc194A0A140LIT1 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.44■□□□□ 0.7
Ccdc194A0A140LIT1 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc194A0A140LIT1 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc194A0A140LIT1 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc194A0A140LIT1 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Ccdc194A0A140LIT1 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc194A0A140LIT1 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms