Protein–RNA interactions for Protein: A0A0G2JG17

Trav23, T cell receptor alpha variable 23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav23A0A0G2JG17 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC15.99■□□□□ 0.15
Trav23A0A0G2JG17 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC15.99■□□□□ 0.15
Trav23A0A0G2JG17 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav23A0A0G2JG17 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav23A0A0G2JG17 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Trav23A0A0G2JG17 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav23A0A0G2JG17 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav23A0A0G2JG17 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trav23A0A0G2JG17 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav23A0A0G2JG17 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav23A0A0G2JG17 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav23A0A0G2JG17 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav23A0A0G2JG17 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav23A0A0G2JG17 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC15.98■□□□□ 0.15
Trav23A0A0G2JG17 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trav23A0A0G2JG17 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav23A0A0G2JG17 Gm5576-201ENSMUST00000075809 1236 ntBASIC15.98■□□□□ 0.15
Trav23A0A0G2JG17 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav23A0A0G2JG17 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Trav23A0A0G2JG17 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC15.98■□□□□ 0.15
Trav23A0A0G2JG17 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC15.98■□□□□ 0.15
Trav23A0A0G2JG17 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Trav23A0A0G2JG17 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav23A0A0G2JG17 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav23A0A0G2JG17 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav23A0A0G2JG17 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav23A0A0G2JG17 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav23A0A0G2JG17 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav23A0A0G2JG17 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC15.97■□□□□ 0.15
Trav23A0A0G2JG17 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav23A0A0G2JG17 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav23A0A0G2JG17 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Trav23A0A0G2JG17 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav23A0A0G2JG17 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav23A0A0G2JG17 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav23A0A0G2JG17 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Trav23A0A0G2JG17 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav23A0A0G2JG17 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC15.96■□□□□ 0.15
Trav23A0A0G2JG17 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav23A0A0G2JG17 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav23A0A0G2JG17 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav23A0A0G2JG17 Gm38342-201ENSMUST00000195710 2980 ntBASIC15.96■□□□□ 0.15
Trav23A0A0G2JG17 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav23A0A0G2JG17 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav23A0A0G2JG17 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC15.96■□□□□ 0.15
Trav23A0A0G2JG17 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Trav23A0A0G2JG17 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Trav23A0A0G2JG17 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Trav23A0A0G2JG17 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav23A0A0G2JG17 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav23A0A0G2JG17 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Trav23A0A0G2JG17 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav23A0A0G2JG17 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav23A0A0G2JG17 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Trav23A0A0G2JG17 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Trav23A0A0G2JG17 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav23A0A0G2JG17 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC15.95■□□□□ 0.14
Trav23A0A0G2JG17 Mir7075-201ENSMUST00000184187 82 ntBASIC15.95■□□□□ 0.14
Trav23A0A0G2JG17 Mir6236-201ENSMUST00000184437 123 ntBASIC15.95■□□□□ 0.14
Trav23A0A0G2JG17 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC15.95■□□□□ 0.14
Trav23A0A0G2JG17 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Trav23A0A0G2JG17 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Trav23A0A0G2JG17 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav23A0A0G2JG17 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav23A0A0G2JG17 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav23A0A0G2JG17 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav23A0A0G2JG17 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Trav23A0A0G2JG17 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
Trav23A0A0G2JG17 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav23A0A0G2JG17 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC15.94■□□□□ 0.14
Trav23A0A0G2JG17 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav23A0A0G2JG17 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav23A0A0G2JG17 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav23A0A0G2JG17 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC15.94■□□□□ 0.14
Trav23A0A0G2JG17 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC15.94■□□□□ 0.14
Trav23A0A0G2JG17 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav23A0A0G2JG17 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav23A0A0G2JG17 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav23A0A0G2JG17 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Trav23A0A0G2JG17 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav23A0A0G2JG17 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav23A0A0G2JG17 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav23A0A0G2JG17 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav23A0A0G2JG17 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav23A0A0G2JG17 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trav23A0A0G2JG17 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trav23A0A0G2JG17 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Trav23A0A0G2JG17 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC15.93■□□□□ 0.14
Trav23A0A0G2JG17 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav23A0A0G2JG17 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav23A0A0G2JG17 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trav23A0A0G2JG17 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav23A0A0G2JG17 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Trav23A0A0G2JG17 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Trav23A0A0G2JG17 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC15.92■□□□□ 0.14
Trav23A0A0G2JG17 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC15.92■□□□□ 0.14
Trav23A0A0G2JG17 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav23A0A0G2JG17 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Trav23A0A0G2JG17 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav23A0A0G2JG17 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms