Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav13n-4A0A0G2JG01 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Trav13n-4A0A0G2JG01 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Trav13n-4A0A0G2JG01 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC15.86■□□□□ 0.13
Trav13n-4A0A0G2JG01 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav13n-4A0A0G2JG01 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC15.86■□□□□ 0.13
Trav13n-4A0A0G2JG01 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav13n-4A0A0G2JG01 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav13n-4A0A0G2JG01 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Trav13n-4A0A0G2JG01 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC15.86■□□□□ 0.13
Trav13n-4A0A0G2JG01 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav13n-4A0A0G2JG01 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
Trav13n-4A0A0G2JG01 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav13n-4A0A0G2JG01 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav13n-4A0A0G2JG01 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Trav13n-4A0A0G2JG01 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav13n-4A0A0G2JG01 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav13n-4A0A0G2JG01 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav13n-4A0A0G2JG01 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav13n-4A0A0G2JG01 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC15.85■□□□□ 0.13
Trav13n-4A0A0G2JG01 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC15.85■□□□□ 0.13
Trav13n-4A0A0G2JG01 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav13n-4A0A0G2JG01 Gm43137-201ENSMUST00000198052 594 ntBASIC15.85■□□□□ 0.13
Trav13n-4A0A0G2JG01 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav13n-4A0A0G2JG01 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav13n-4A0A0G2JG01 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Trav13n-4A0A0G2JG01 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav13n-4A0A0G2JG01 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav13n-4A0A0G2JG01 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC15.84■□□□□ 0.13
Trav13n-4A0A0G2JG01 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav13n-4A0A0G2JG01 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav13n-4A0A0G2JG01 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav13n-4A0A0G2JG01 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav13n-4A0A0G2JG01 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav13n-4A0A0G2JG01 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav13n-4A0A0G2JG01 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC15.84■□□□□ 0.13
Trav13n-4A0A0G2JG01 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Trav13n-4A0A0G2JG01 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC15.84■□□□□ 0.13
Trav13n-4A0A0G2JG01 Slc35b2-207ENSMUST00000226086 850 ntBASIC15.84■□□□□ 0.13
Trav13n-4A0A0G2JG01 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
Trav13n-4A0A0G2JG01 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav13n-4A0A0G2JG01 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav13n-4A0A0G2JG01 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Trav13n-4A0A0G2JG01 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Trav13n-4A0A0G2JG01 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Trav13n-4A0A0G2JG01 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Trav13n-4A0A0G2JG01 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC15.83■□□□□ 0.12
Trav13n-4A0A0G2JG01 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav13n-4A0A0G2JG01 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC15.83■□□□□ 0.12
Trav13n-4A0A0G2JG01 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trav13n-4A0A0G2JG01 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Trav13n-4A0A0G2JG01 Gm8495-201ENSMUST00000188740 694 ntBASIC15.83■□□□□ 0.12
Trav13n-4A0A0G2JG01 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
Trav13n-4A0A0G2JG01 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav13n-4A0A0G2JG01 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trav13n-4A0A0G2JG01 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav13n-4A0A0G2JG01 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav13n-4A0A0G2JG01 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav13n-4A0A0G2JG01 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Trav13n-4A0A0G2JG01 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC15.83■□□□□ 0.12
Trav13n-4A0A0G2JG01 Gm43545-201ENSMUST00000196765 2779 ntBASIC15.82■□□□□ 0.12
Trav13n-4A0A0G2JG01 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav13n-4A0A0G2JG01 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav13n-4A0A0G2JG01 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC15.82■□□□□ 0.12
Trav13n-4A0A0G2JG01 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav13n-4A0A0G2JG01 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Trav13n-4A0A0G2JG01 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav13n-4A0A0G2JG01 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC15.82■□□□□ 0.12
Trav13n-4A0A0G2JG01 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav13n-4A0A0G2JG01 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav13n-4A0A0G2JG01 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC15.82■□□□□ 0.12
Trav13n-4A0A0G2JG01 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav13n-4A0A0G2JG01 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav13n-4A0A0G2JG01 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Trav13n-4A0A0G2JG01 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav13n-4A0A0G2JG01 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav13n-4A0A0G2JG01 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC15.81■□□□□ 0.12
Trav13n-4A0A0G2JG01 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC15.81■□□□□ 0.12
Trav13n-4A0A0G2JG01 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav13n-4A0A0G2JG01 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC15.81■□□□□ 0.12
Trav13n-4A0A0G2JG01 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Trav13n-4A0A0G2JG01 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC15.81■□□□□ 0.12
Trav13n-4A0A0G2JG01 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav13n-4A0A0G2JG01 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav13n-4A0A0G2JG01 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav13n-4A0A0G2JG01 Gm6139-201ENSMUST00000079261 882 ntBASIC15.81■□□□□ 0.12
Trav13n-4A0A0G2JG01 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav13n-4A0A0G2JG01 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC15.8■□□□□ 0.12
Trav13n-4A0A0G2JG01 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav13n-4A0A0G2JG01 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav13n-4A0A0G2JG01 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav13n-4A0A0G2JG01 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav13n-4A0A0G2JG01 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC15.8■□□□□ 0.12
Trav13n-4A0A0G2JG01 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC15.8■□□□□ 0.12
Trav13n-4A0A0G2JG01 Gm18284-201ENSMUST00000172604 624 ntBASIC15.8■□□□□ 0.12
Trav13n-4A0A0G2JG01 Mir7075-201ENSMUST00000184187 82 ntBASIC15.8■□□□□ 0.12
Trav13n-4A0A0G2JG01 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Trav13n-4A0A0G2JG01 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav13n-4A0A0G2JG01 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC15.8■□□□□ 0.12
Trav13n-4A0A0G2JG01 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms