Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Gm27502-201ENSMUST00000183495 199 ntBASIC14.78□□□□□ -0.04
Trav3n-3A0A0G2JEM0 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC14.78□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav3n-3A0A0G2JEM0 AC158990.1-201ENSMUST00000221450 2016 ntBASIC14.77□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Gm11847-201ENSMUST00000125165 1119 ntBASIC14.77□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC14.77□□□□□ -0.05
Trav3n-3A0A0G2JEM0 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trav3n-3A0A0G2JEM0 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav3n-3A0A0G2JEM0 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC14.77□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trav3n-3A0A0G2JEM0 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC14.76□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC14.76□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC14.76□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC14.76□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Gm45141-201ENSMUST00000206502 1888 ntBASIC14.76□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC14.75□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Gm10420-201ENSMUST00000121713 882 ntBASIC14.75□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC14.75□□□□□ -0.05
Trav3n-3A0A0G2JEM0 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Gm37035-201ENSMUST00000194809 2148 ntBASIC14.75□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav3n-3A0A0G2JEM0 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC14.73□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms