Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav9-4A0A0B4J1K2 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav9-4A0A0B4J1K2 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav9-4A0A0B4J1K2 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav9-4A0A0B4J1K2 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Trav9-4A0A0B4J1K2 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav9-4A0A0B4J1K2 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Trav9-4A0A0B4J1K2 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC14.73□□□□□ -0.05
Trav9-4A0A0B4J1K2 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav9-4A0A0B4J1K2 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Trav9-4A0A0B4J1K2 Gm43909-201ENSMUST00000203443 1876 ntBASIC14.72□□□□□ -0.05
Trav9-4A0A0B4J1K2 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav9-4A0A0B4J1K2 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav9-4A0A0B4J1K2 Mir7075-201ENSMUST00000184187 82 ntBASIC14.72□□□□□ -0.05
Trav9-4A0A0B4J1K2 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Trav9-4A0A0B4J1K2 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Trav9-4A0A0B4J1K2 Cdkn3-203ENSMUST00000227149 1952 ntBASIC14.72□□□□□ -0.05
Trav9-4A0A0B4J1K2 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Trav9-4A0A0B4J1K2 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav9-4A0A0B4J1K2 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav9-4A0A0B4J1K2 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav9-4A0A0B4J1K2 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
Trav9-4A0A0B4J1K2 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav9-4A0A0B4J1K2 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav9-4A0A0B4J1K2 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav9-4A0A0B4J1K2 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Trav9-4A0A0B4J1K2 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav9-4A0A0B4J1K2 Gm7160-202ENSMUST00000188519 1027 ntBASIC14.71□□□□□ -0.05
Trav9-4A0A0B4J1K2 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC14.71□□□□□ -0.05
Trav9-4A0A0B4J1K2 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav9-4A0A0B4J1K2 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav9-4A0A0B4J1K2 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav9-4A0A0B4J1K2 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC14.71□□□□□ -0.05
Trav9-4A0A0B4J1K2 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC14.71□□□□□ -0.05
Trav9-4A0A0B4J1K2 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav9-4A0A0B4J1K2 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav9-4A0A0B4J1K2 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav9-4A0A0B4J1K2 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Trav9-4A0A0B4J1K2 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav9-4A0A0B4J1K2 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav9-4A0A0B4J1K2 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
Trav9-4A0A0B4J1K2 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
Trav9-4A0A0B4J1K2 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav9-4A0A0B4J1K2 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav9-4A0A0B4J1K2 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav9-4A0A0B4J1K2 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Trav9-4A0A0B4J1K2 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav9-4A0A0B4J1K2 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Trav9-4A0A0B4J1K2 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav9-4A0A0B4J1K2 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav9-4A0A0B4J1K2 Gm12251-201ENSMUST00000117893 792 ntBASIC14.7□□□□□ -0.06
Trav9-4A0A0B4J1K2 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav9-4A0A0B4J1K2 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav9-4A0A0B4J1K2 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav9-4A0A0B4J1K2 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav9-4A0A0B4J1K2 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav9-4A0A0B4J1K2 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
Trav9-4A0A0B4J1K2 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
Trav9-4A0A0B4J1K2 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav9-4A0A0B4J1K2 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Trav9-4A0A0B4J1K2 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Trav9-4A0A0B4J1K2 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav9-4A0A0B4J1K2 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav9-4A0A0B4J1K2 Spcs1-204ENSMUST00000226782 949 ntBASIC14.69□□□□□ -0.06
Trav9-4A0A0B4J1K2 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav9-4A0A0B4J1K2 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav9-4A0A0B4J1K2 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Trav9-4A0A0B4J1K2 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav9-4A0A0B4J1K2 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav9-4A0A0B4J1K2 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav9-4A0A0B4J1K2 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Trav9-4A0A0B4J1K2 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav9-4A0A0B4J1K2 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav9-4A0A0B4J1K2 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav9-4A0A0B4J1K2 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav9-4A0A0B4J1K2 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav9-4A0A0B4J1K2 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav9-4A0A0B4J1K2 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav9-4A0A0B4J1K2 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav9-4A0A0B4J1K2 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav9-4A0A0B4J1K2 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav9-4A0A0B4J1K2 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav9-4A0A0B4J1K2 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav9-4A0A0B4J1K2 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC14.67□□□□□ -0.06
Trav9-4A0A0B4J1K2 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav9-4A0A0B4J1K2 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav9-4A0A0B4J1K2 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Trav9-4A0A0B4J1K2 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav9-4A0A0B4J1K2 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav9-4A0A0B4J1K2 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav9-4A0A0B4J1K2 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav9-4A0A0B4J1K2 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC14.67□□□□□ -0.06
Trav9-4A0A0B4J1K2 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC14.67□□□□□ -0.06
Trav9-4A0A0B4J1K2 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Trav9-4A0A0B4J1K2 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC14.67□□□□□ -0.06
Trav9-4A0A0B4J1K2 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav9-4A0A0B4J1K2 Gm6802-201ENSMUST00000167843 1983 ntBASIC14.67□□□□□ -0.06
Trav9-4A0A0B4J1K2 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav9-4A0A0B4J1K2 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC14.66□□□□□ -0.06
Trav9-4A0A0B4J1K2 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms