Protein–RNA interactions for Protein: A0A0B4J1H5

Trbv20, T cell receptor beta, variable 20 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv20A0A0B4J1H5 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv20A0A0B4J1H5 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv20A0A0B4J1H5 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv20A0A0B4J1H5 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv20A0A0B4J1H5 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv20A0A0B4J1H5 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv20A0A0B4J1H5 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Trbv20A0A0B4J1H5 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Trbv20A0A0B4J1H5 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.56■□□□□ 0.4
Trbv20A0A0B4J1H5 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv20A0A0B4J1H5 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv20A0A0B4J1H5 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
Trbv20A0A0B4J1H5 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv20A0A0B4J1H5 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv20A0A0B4J1H5 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv20A0A0B4J1H5 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Trbv20A0A0B4J1H5 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Trbv20A0A0B4J1H5 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
Trbv20A0A0B4J1H5 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trbv20A0A0B4J1H5 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trbv20A0A0B4J1H5 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Trbv20A0A0B4J1H5 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trbv20A0A0B4J1H5 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Trbv20A0A0B4J1H5 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trbv20A0A0B4J1H5 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trbv20A0A0B4J1H5 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trbv20A0A0B4J1H5 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trbv20A0A0B4J1H5 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trbv20A0A0B4J1H5 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Trbv20A0A0B4J1H5 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
Trbv20A0A0B4J1H5 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trbv20A0A0B4J1H5 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC17.54■□□□□ 0.4
Trbv20A0A0B4J1H5 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trbv20A0A0B4J1H5 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Trbv20A0A0B4J1H5 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Trbv20A0A0B4J1H5 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Trbv20A0A0B4J1H5 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
Trbv20A0A0B4J1H5 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trbv20A0A0B4J1H5 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Trbv20A0A0B4J1H5 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trbv20A0A0B4J1H5 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Trbv20A0A0B4J1H5 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trbv20A0A0B4J1H5 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trbv20A0A0B4J1H5 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trbv20A0A0B4J1H5 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trbv20A0A0B4J1H5 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trbv20A0A0B4J1H5 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trbv20A0A0B4J1H5 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC17.53■□□□□ 0.4
Trbv20A0A0B4J1H5 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC17.53■□□□□ 0.4
Trbv20A0A0B4J1H5 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trbv20A0A0B4J1H5 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.53■□□□□ 0.4
Trbv20A0A0B4J1H5 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trbv20A0A0B4J1H5 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trbv20A0A0B4J1H5 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trbv20A0A0B4J1H5 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
Trbv20A0A0B4J1H5 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trbv20A0A0B4J1H5 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.52■□□□□ 0.4
Trbv20A0A0B4J1H5 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Trbv20A0A0B4J1H5 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trbv20A0A0B4J1H5 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.52■□□□□ 0.4
Trbv20A0A0B4J1H5 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Trbv20A0A0B4J1H5 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trbv20A0A0B4J1H5 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trbv20A0A0B4J1H5 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trbv20A0A0B4J1H5 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trbv20A0A0B4J1H5 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trbv20A0A0B4J1H5 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.52■□□□□ 0.39
Trbv20A0A0B4J1H5 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.52■□□□□ 0.39
Trbv20A0A0B4J1H5 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trbv20A0A0B4J1H5 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trbv20A0A0B4J1H5 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Trbv20A0A0B4J1H5 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trbv20A0A0B4J1H5 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Trbv20A0A0B4J1H5 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trbv20A0A0B4J1H5 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trbv20A0A0B4J1H5 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trbv20A0A0B4J1H5 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trbv20A0A0B4J1H5 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC17.51■□□□□ 0.39
Trbv20A0A0B4J1H5 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trbv20A0A0B4J1H5 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.51■□□□□ 0.39
Trbv20A0A0B4J1H5 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trbv20A0A0B4J1H5 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trbv20A0A0B4J1H5 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trbv20A0A0B4J1H5 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trbv20A0A0B4J1H5 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trbv20A0A0B4J1H5 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.5■□□□□ 0.39
Trbv20A0A0B4J1H5 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trbv20A0A0B4J1H5 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trbv20A0A0B4J1H5 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trbv20A0A0B4J1H5 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trbv20A0A0B4J1H5 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trbv20A0A0B4J1H5 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trbv20A0A0B4J1H5 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trbv20A0A0B4J1H5 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.5■□□□□ 0.39
Trbv20A0A0B4J1H5 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trbv20A0A0B4J1H5 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trbv20A0A0B4J1H5 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trbv20A0A0B4J1H5 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trbv20A0A0B4J1H5 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trbv20A0A0B4J1H5 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 91.3 ms