Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv3A0A0A6YYE2 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
Trbv3A0A0A6YYE2 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Trbv3A0A0A6YYE2 AC124603.1-201ENSMUST00000223843 308 ntBASIC15.13■□□□□ 0.01
Trbv3A0A0A6YYE2 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv3A0A0A6YYE2 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv3A0A0A6YYE2 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv3A0A0A6YYE2 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC15.13■□□□□ 0.01
Trbv3A0A0A6YYE2 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv3A0A0A6YYE2 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv3A0A0A6YYE2 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv3A0A0A6YYE2 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv3A0A0A6YYE2 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trbv3A0A0A6YYE2 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trbv3A0A0A6YYE2 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trbv3A0A0A6YYE2 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trbv3A0A0A6YYE2 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trbv3A0A0A6YYE2 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trbv3A0A0A6YYE2 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trbv3A0A0A6YYE2 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trbv3A0A0A6YYE2 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
Trbv3A0A0A6YYE2 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC15.12■□□□□ 0.01
Trbv3A0A0A6YYE2 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trbv3A0A0A6YYE2 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trbv3A0A0A6YYE2 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Trbv3A0A0A6YYE2 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv3A0A0A6YYE2 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
Trbv3A0A0A6YYE2 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv3A0A0A6YYE2 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv3A0A0A6YYE2 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv3A0A0A6YYE2 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv3A0A0A6YYE2 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv3A0A0A6YYE2 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Trbv3A0A0A6YYE2 Gm35558-201ENSMUST00000222675 2219 ntBASIC15.11■□□□□ 0.01
Trbv3A0A0A6YYE2 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC15.11■□□□□ 0.01
Trbv3A0A0A6YYE2 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv3A0A0A6YYE2 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv3A0A0A6YYE2 Gm43182-201ENSMUST00000199476 2528 ntBASIC15.11■□□□□ 0.01
Trbv3A0A0A6YYE2 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv3A0A0A6YYE2 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv3A0A0A6YYE2 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv3A0A0A6YYE2 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv3A0A0A6YYE2 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv3A0A0A6YYE2 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv3A0A0A6YYE2 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv3A0A0A6YYE2 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv3A0A0A6YYE2 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv3A0A0A6YYE2 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv3A0A0A6YYE2 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trbv3A0A0A6YYE2 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv3A0A0A6YYE2 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv3A0A0A6YYE2 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Trbv3A0A0A6YYE2 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC15.1■□□□□ 0.01
Trbv3A0A0A6YYE2 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trbv3A0A0A6YYE2 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv3A0A0A6YYE2 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv3A0A0A6YYE2 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trbv3A0A0A6YYE2 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC15.1■□□□□ 0.01
Trbv3A0A0A6YYE2 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Trbv3A0A0A6YYE2 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv3A0A0A6YYE2 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv3A0A0A6YYE2 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv3A0A0A6YYE2 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Trbv3A0A0A6YYE2 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv3A0A0A6YYE2 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv3A0A0A6YYE2 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
Trbv3A0A0A6YYE2 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Trbv3A0A0A6YYE2 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC15.09■□□□□ 0.01
Trbv3A0A0A6YYE2 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC15.09■□□□□ 0.01
Trbv3A0A0A6YYE2 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv3A0A0A6YYE2 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv3A0A0A6YYE2 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC15.09■□□□□ 0.01
Trbv3A0A0A6YYE2 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Trbv3A0A0A6YYE2 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trbv3A0A0A6YYE2 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trbv3A0A0A6YYE2 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trbv3A0A0A6YYE2 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC15.08■□□□□ 0
Trbv3A0A0A6YYE2 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Trbv3A0A0A6YYE2 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trbv3A0A0A6YYE2 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trbv3A0A0A6YYE2 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trbv3A0A0A6YYE2 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trbv3A0A0A6YYE2 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Trbv3A0A0A6YYE2 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Trbv3A0A0A6YYE2 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trbv3A0A0A6YYE2 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trbv3A0A0A6YYE2 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trbv3A0A0A6YYE2 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Trbv3A0A0A6YYE2 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trbv3A0A0A6YYE2 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC15.07■□□□□ 0
Trbv3A0A0A6YYE2 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC15.07■□□□□ 0
Trbv3A0A0A6YYE2 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC15.07■□□□□ 0
Trbv3A0A0A6YYE2 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Trbv3A0A0A6YYE2 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trbv3A0A0A6YYE2 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Trbv3A0A0A6YYE2 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trbv3A0A0A6YYE2 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trbv3A0A0A6YYE2 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trbv3A0A0A6YYE2 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trbv3A0A0A6YYE2 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms