Protein–RNA interactions for Protein: A0A0A6YXN8

Sirpb1b, Signal-regulatory protein beta 1B, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1bA0A0A6YXN8 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Sirpb1bA0A0A6YXN8 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sirpb1bA0A0A6YXN8 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.28■□□□□ 0.36
Sirpb1bA0A0A6YXN8 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sirpb1bA0A0A6YXN8 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Sirpb1bA0A0A6YXN8 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Sirpb1bA0A0A6YXN8 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Sirpb1bA0A0A6YXN8 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sirpb1bA0A0A6YXN8 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Sirpb1bA0A0A6YXN8 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sirpb1bA0A0A6YXN8 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sirpb1bA0A0A6YXN8 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Sirpb1bA0A0A6YXN8 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sirpb1bA0A0A6YXN8 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sirpb1bA0A0A6YXN8 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sirpb1bA0A0A6YXN8 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sirpb1bA0A0A6YXN8 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sirpb1bA0A0A6YXN8 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
Sirpb1bA0A0A6YXN8 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
Sirpb1bA0A0A6YXN8 Gm5297-201ENSMUST00000198555 1171 ntBASIC17.27■□□□□ 0.36
Sirpb1bA0A0A6YXN8 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sirpb1bA0A0A6YXN8 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sirpb1bA0A0A6YXN8 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sirpb1bA0A0A6YXN8 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sirpb1bA0A0A6YXN8 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sirpb1bA0A0A6YXN8 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Sirpb1bA0A0A6YXN8 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Sirpb1bA0A0A6YXN8 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sirpb1bA0A0A6YXN8 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sirpb1bA0A0A6YXN8 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sirpb1bA0A0A6YXN8 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sirpb1bA0A0A6YXN8 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sirpb1bA0A0A6YXN8 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sirpb1bA0A0A6YXN8 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sirpb1bA0A0A6YXN8 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sirpb1bA0A0A6YXN8 AC158990.1-201ENSMUST00000221450 2016 ntBASIC17.26■□□□□ 0.35
Sirpb1bA0A0A6YXN8 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sirpb1bA0A0A6YXN8 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.25■□□□□ 0.35
Sirpb1bA0A0A6YXN8 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sirpb1bA0A0A6YXN8 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sirpb1bA0A0A6YXN8 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sirpb1bA0A0A6YXN8 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sirpb1bA0A0A6YXN8 Flvcr1-202ENSMUST00000191946 1216 ntBASIC17.25■□□□□ 0.35
Sirpb1bA0A0A6YXN8 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sirpb1bA0A0A6YXN8 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Sirpb1bA0A0A6YXN8 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Sirpb1bA0A0A6YXN8 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sirpb1bA0A0A6YXN8 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sirpb1bA0A0A6YXN8 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sirpb1bA0A0A6YXN8 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sirpb1bA0A0A6YXN8 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sirpb1bA0A0A6YXN8 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sirpb1bA0A0A6YXN8 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sirpb1bA0A0A6YXN8 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Sirpb1bA0A0A6YXN8 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sirpb1bA0A0A6YXN8 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
Sirpb1bA0A0A6YXN8 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sirpb1bA0A0A6YXN8 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sirpb1bA0A0A6YXN8 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sirpb1bA0A0A6YXN8 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sirpb1bA0A0A6YXN8 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Sirpb1bA0A0A6YXN8 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sirpb1bA0A0A6YXN8 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sirpb1bA0A0A6YXN8 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.23■□□□□ 0.35
Sirpb1bA0A0A6YXN8 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.23■□□□□ 0.35
Sirpb1bA0A0A6YXN8 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sirpb1bA0A0A6YXN8 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sirpb1bA0A0A6YXN8 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sirpb1bA0A0A6YXN8 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sirpb1bA0A0A6YXN8 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sirpb1bA0A0A6YXN8 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.23■□□□□ 0.35
Sirpb1bA0A0A6YXN8 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sirpb1bA0A0A6YXN8 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sirpb1bA0A0A6YXN8 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Sirpb1bA0A0A6YXN8 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Sirpb1bA0A0A6YXN8 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sirpb1bA0A0A6YXN8 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sirpb1bA0A0A6YXN8 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sirpb1bA0A0A6YXN8 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Sirpb1bA0A0A6YXN8 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sirpb1bA0A0A6YXN8 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sirpb1bA0A0A6YXN8 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sirpb1bA0A0A6YXN8 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sirpb1bA0A0A6YXN8 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sirpb1bA0A0A6YXN8 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Sirpb1bA0A0A6YXN8 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sirpb1bA0A0A6YXN8 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.21■□□□□ 0.34
Sirpb1bA0A0A6YXN8 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Sirpb1bA0A0A6YXN8 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC17.2■□□□□ 0.34
Sirpb1bA0A0A6YXN8 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Sirpb1bA0A0A6YXN8 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sirpb1bA0A0A6YXN8 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sirpb1bA0A0A6YXN8 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Sirpb1bA0A0A6YXN8 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.2■□□□□ 0.34
Sirpb1bA0A0A6YXN8 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.2■□□□□ 0.34
Sirpb1bA0A0A6YXN8 Gm9870-201ENSMUST00000063874 645 ntBASIC17.2■□□□□ 0.34
Sirpb1bA0A0A6YXN8 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Sirpb1bA0A0A6YXN8 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sirpb1bA0A0A6YXN8 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sirpb1bA0A0A6YXN8 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms