Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6d-5A0A075B6B9 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6d-5A0A075B6B9 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Trav6d-5A0A075B6B9 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Trav6d-5A0A075B6B9 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
Trav6d-5A0A075B6B9 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6d-5A0A075B6B9 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6d-5A0A075B6B9 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Trav6d-5A0A075B6B9 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC15.84■□□□□ 0.13
Trav6d-5A0A075B6B9 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6d-5A0A075B6B9 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6d-5A0A075B6B9 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6d-5A0A075B6B9 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
Trav6d-5A0A075B6B9 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Trav6d-5A0A075B6B9 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Trav6d-5A0A075B6B9 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6d-5A0A075B6B9 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6d-5A0A075B6B9 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6d-5A0A075B6B9 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6d-5A0A075B6B9 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav6d-5A0A075B6B9 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trav6d-5A0A075B6B9 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Trav6d-5A0A075B6B9 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC15.83■□□□□ 0.12
Trav6d-5A0A075B6B9 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Trav6d-5A0A075B6B9 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav6d-5A0A075B6B9 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav6d-5A0A075B6B9 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Trav6d-5A0A075B6B9 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav6d-5A0A075B6B9 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav6d-5A0A075B6B9 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav6d-5A0A075B6B9 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav6d-5A0A075B6B9 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav6d-5A0A075B6B9 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6d-5A0A075B6B9 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6d-5A0A075B6B9 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6d-5A0A075B6B9 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Trav6d-5A0A075B6B9 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6d-5A0A075B6B9 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Trav6d-5A0A075B6B9 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Trav6d-5A0A075B6B9 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC15.82■□□□□ 0.12
Trav6d-5A0A075B6B9 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6d-5A0A075B6B9 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
Trav6d-5A0A075B6B9 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC15.81■□□□□ 0.12
Trav6d-5A0A075B6B9 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6d-5A0A075B6B9 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Trav6d-5A0A075B6B9 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6d-5A0A075B6B9 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC15.81■□□□□ 0.12
Trav6d-5A0A075B6B9 Gm12366-201ENSMUST00000121722 873 ntBASIC15.81■□□□□ 0.12
Trav6d-5A0A075B6B9 BC021767-201ENSMUST00000126387 1716 ntBASIC15.81■□□□□ 0.12
Trav6d-5A0A075B6B9 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC15.81■□□□□ 0.12
Trav6d-5A0A075B6B9 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC15.81■□□□□ 0.12
Trav6d-5A0A075B6B9 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6d-5A0A075B6B9 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6d-5A0A075B6B9 Gm6627-201ENSMUST00000218299 2386 ntBASIC15.81■□□□□ 0.12
Trav6d-5A0A075B6B9 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6d-5A0A075B6B9 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6d-5A0A075B6B9 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6d-5A0A075B6B9 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6d-5A0A075B6B9 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6d-5A0A075B6B9 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6d-5A0A075B6B9 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC15.81■□□□□ 0.12
Trav6d-5A0A075B6B9 Gm5786-201ENSMUST00000085368 882 ntBASIC15.81■□□□□ 0.12
Trav6d-5A0A075B6B9 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6d-5A0A075B6B9 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6d-5A0A075B6B9 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6d-5A0A075B6B9 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6d-5A0A075B6B9 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6d-5A0A075B6B9 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6d-5A0A075B6B9 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC15.8■□□□□ 0.12
Trav6d-5A0A075B6B9 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6d-5A0A075B6B9 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Trav6d-5A0A075B6B9 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6d-5A0A075B6B9 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6d-5A0A075B6B9 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6d-5A0A075B6B9 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6d-5A0A075B6B9 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6d-5A0A075B6B9 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6d-5A0A075B6B9 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6d-5A0A075B6B9 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Trav6d-5A0A075B6B9 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6d-5A0A075B6B9 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6d-5A0A075B6B9 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6d-5A0A075B6B9 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6d-5A0A075B6B9 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC15.79■□□□□ 0.12
Trav6d-5A0A075B6B9 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6d-5A0A075B6B9 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6d-5A0A075B6B9 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6d-5A0A075B6B9 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6d-5A0A075B6B9 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6d-5A0A075B6B9 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6d-5A0A075B6B9 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6d-5A0A075B6B9 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6d-5A0A075B6B9 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6d-5A0A075B6B9 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6d-5A0A075B6B9 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC15.79■□□□□ 0.12
Trav6d-5A0A075B6B9 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC15.79■□□□□ 0.12
Trav6d-5A0A075B6B9 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6d-5A0A075B6B9 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6d-5A0A075B6B9 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6d-5A0A075B6B9 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms