Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trav6-5A0A075B6B5 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6-5A0A075B6B5 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6-5A0A075B6B5 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trav6-5A0A075B6B5 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6-5A0A075B6B5 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC15.2■□□□□ 0.02
Trav6-5A0A075B6B5 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6-5A0A075B6B5 Gm5540-201ENSMUST00000131852 1848 ntBASIC15.2■□□□□ 0.02
Trav6-5A0A075B6B5 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6-5A0A075B6B5 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6-5A0A075B6B5 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6-5A0A075B6B5 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6-5A0A075B6B5 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Trav6-5A0A075B6B5 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6-5A0A075B6B5 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6-5A0A075B6B5 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6-5A0A075B6B5 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6-5A0A075B6B5 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC15.19■□□□□ 0.02
Trav6-5A0A075B6B5 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6-5A0A075B6B5 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC15.18■□□□□ 0.02
Trav6-5A0A075B6B5 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC15.18■□□□□ 0.02
Trav6-5A0A075B6B5 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6-5A0A075B6B5 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6-5A0A075B6B5 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6-5A0A075B6B5 Gm43592-201ENSMUST00000196922 1165 ntBASIC15.18■□□□□ 0.02
Trav6-5A0A075B6B5 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6-5A0A075B6B5 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Trav6-5A0A075B6B5 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6-5A0A075B6B5 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Trav6-5A0A075B6B5 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6-5A0A075B6B5 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Trav6-5A0A075B6B5 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6-5A0A075B6B5 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Trav6-5A0A075B6B5 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6-5A0A075B6B5 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6-5A0A075B6B5 Cdkn3-203ENSMUST00000227149 1952 ntBASIC15.17■□□□□ 0.02
Trav6-5A0A075B6B5 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6-5A0A075B6B5 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC15.17■□□□□ 0.02
Trav6-5A0A075B6B5 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC15.17■□□□□ 0.02
Trav6-5A0A075B6B5 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6-5A0A075B6B5 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6-5A0A075B6B5 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6-5A0A075B6B5 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6-5A0A075B6B5 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6-5A0A075B6B5 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6-5A0A075B6B5 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6-5A0A075B6B5 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6-5A0A075B6B5 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6-5A0A075B6B5 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6-5A0A075B6B5 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Trav6-5A0A075B6B5 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6-5A0A075B6B5 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Trav6-5A0A075B6B5 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6-5A0A075B6B5 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6-5A0A075B6B5 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC15.16■□□□□ 0.02
Trav6-5A0A075B6B5 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6-5A0A075B6B5 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6-5A0A075B6B5 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6-5A0A075B6B5 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6-5A0A075B6B5 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
Trav6-5A0A075B6B5 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6-5A0A075B6B5 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6-5A0A075B6B5 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6-5A0A075B6B5 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Trav6-5A0A075B6B5 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Trav6-5A0A075B6B5 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6-5A0A075B6B5 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6-5A0A075B6B5 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6-5A0A075B6B5 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6-5A0A075B6B5 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6-5A0A075B6B5 Gm43182-201ENSMUST00000199476 2528 ntBASIC15.15■□□□□ 0.02
Trav6-5A0A075B6B5 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC15.15■□□□□ 0.02
Trav6-5A0A075B6B5 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6-5A0A075B6B5 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6-5A0A075B6B5 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6-5A0A075B6B5 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC15.15■□□□□ 0.02
Trav6-5A0A075B6B5 BC021767-201ENSMUST00000126387 1716 ntBASIC15.14■□□□□ 0.01
Trav6-5A0A075B6B5 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-5A0A075B6B5 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-5A0A075B6B5 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-5A0A075B6B5 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
Trav6-5A0A075B6B5 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-5A0A075B6B5 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-5A0A075B6B5 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-5A0A075B6B5 AC124603.1-201ENSMUST00000223843 308 ntBASIC15.14■□□□□ 0.01
Trav6-5A0A075B6B5 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-5A0A075B6B5 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
Trav6-5A0A075B6B5 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-5A0A075B6B5 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-5A0A075B6B5 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-5A0A075B6B5 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-5A0A075B6B5 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Trav6-5A0A075B6B5 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6-5A0A075B6B5 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6-5A0A075B6B5 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6-5A0A075B6B5 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC15.13■□□□□ 0.01
Trav6-5A0A075B6B5 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6-5A0A075B6B5 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6-5A0A075B6B5 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6-5A0A075B6B5 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms