Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Trav6n-6A0A075B6B2 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6n-6A0A075B6B2 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC14.55□□□□□ -0.08
Trav6n-6A0A075B6B2 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6n-6A0A075B6B2 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Trav6n-6A0A075B6B2 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6n-6A0A075B6B2 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Trav6n-6A0A075B6B2 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6n-6A0A075B6B2 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6n-6A0A075B6B2 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6n-6A0A075B6B2 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6n-6A0A075B6B2 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC14.55□□□□□ -0.08
Trav6n-6A0A075B6B2 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC14.55□□□□□ -0.08
Trav6n-6A0A075B6B2 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6n-6A0A075B6B2 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC14.55□□□□□ -0.08
Trav6n-6A0A075B6B2 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6n-6A0A075B6B2 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6n-6A0A075B6B2 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6n-6A0A075B6B2 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6n-6A0A075B6B2 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6n-6A0A075B6B2 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6n-6A0A075B6B2 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6n-6A0A075B6B2 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC14.54□□□□□ -0.08
Trav6n-6A0A075B6B2 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6n-6A0A075B6B2 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6n-6A0A075B6B2 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6n-6A0A075B6B2 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6n-6A0A075B6B2 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6n-6A0A075B6B2 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Trav6n-6A0A075B6B2 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Trav6n-6A0A075B6B2 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6n-6A0A075B6B2 Gm5540-201ENSMUST00000131852 1848 ntBASIC14.54□□□□□ -0.08
Trav6n-6A0A075B6B2 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6n-6A0A075B6B2 AC158990.1-201ENSMUST00000221450 2016 ntBASIC14.54□□□□□ -0.08
Trav6n-6A0A075B6B2 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6n-6A0A075B6B2 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6n-6A0A075B6B2 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6n-6A0A075B6B2 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC14.54□□□□□ -0.08
Trav6n-6A0A075B6B2 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6n-6A0A075B6B2 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6n-6A0A075B6B2 Fam105a-203ENSMUST00000226170 3043 ntBASIC14.54□□□□□ -0.08
Trav6n-6A0A075B6B2 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6n-6A0A075B6B2 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6n-6A0A075B6B2 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6n-6A0A075B6B2 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Trav6n-6A0A075B6B2 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6n-6A0A075B6B2 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6n-6A0A075B6B2 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6n-6A0A075B6B2 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Trav6n-6A0A075B6B2 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6n-6A0A075B6B2 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC14.53□□□□□ -0.08
Trav6n-6A0A075B6B2 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6n-6A0A075B6B2 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6n-6A0A075B6B2 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6n-6A0A075B6B2 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Trav6n-6A0A075B6B2 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6n-6A0A075B6B2 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav6n-6A0A075B6B2 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav6n-6A0A075B6B2 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav6n-6A0A075B6B2 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav6n-6A0A075B6B2 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav6n-6A0A075B6B2 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav6n-6A0A075B6B2 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav6n-6A0A075B6B2 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav6n-6A0A075B6B2 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC14.52□□□□□ -0.08
Trav6n-6A0A075B6B2 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Trav6n-6A0A075B6B2 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6n-6A0A075B6B2 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Trav6n-6A0A075B6B2 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC14.52□□□□□ -0.09
Trav6n-6A0A075B6B2 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6n-6A0A075B6B2 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Trav6n-6A0A075B6B2 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6n-6A0A075B6B2 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6n-6A0A075B6B2 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6n-6A0A075B6B2 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6n-6A0A075B6B2 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6n-6A0A075B6B2 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6n-6A0A075B6B2 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6n-6A0A075B6B2 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6n-6A0A075B6B2 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC14.51□□□□□ -0.09
Trav6n-6A0A075B6B2 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6n-6A0A075B6B2 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC14.51□□□□□ -0.09
Trav6n-6A0A075B6B2 Gm40881-201ENSMUST00000223397 166 ntBASIC14.51□□□□□ -0.09
Trav6n-6A0A075B6B2 Rps24-207ENSMUST00000224568 714 ntBASIC14.51□□□□□ -0.09
Trav6n-6A0A075B6B2 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC14.51□□□□□ -0.09
Trav6n-6A0A075B6B2 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6n-6A0A075B6B2 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6n-6A0A075B6B2 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6n-6A0A075B6B2 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC14.51□□□□□ -0.09
Trav6n-6A0A075B6B2 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Trav6n-6A0A075B6B2 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC14.51□□□□□ -0.09
Trav6n-6A0A075B6B2 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Trav6n-6A0A075B6B2 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC14.51□□□□□ -0.09
Trav6n-6A0A075B6B2 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6n-6A0A075B6B2 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6n-6A0A075B6B2 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6n-6A0A075B6B2 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6n-6A0A075B6B2 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Trav6n-6A0A075B6B2 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC14.5□□□□□ -0.09
Trav6n-6A0A075B6B2 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms