Protein–RNA interactions for Protein: A0A075B625

Trav4d-3, T cell receptor alpha variable 4D-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4d-3A0A075B625 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav4d-3A0A075B625 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav4d-3A0A075B625 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav4d-3A0A075B625 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC13.37□□□□□ -0.27
Trav4d-3A0A075B625 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav4d-3A0A075B625 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav4d-3A0A075B625 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
Trav4d-3A0A075B625 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav4d-3A0A075B625 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav4d-3A0A075B625 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav4d-3A0A075B625 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav4d-3A0A075B625 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav4d-3A0A075B625 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trav4d-3A0A075B625 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav4d-3A0A075B625 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav4d-3A0A075B625 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav4d-3A0A075B625 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC13.36□□□□□ -0.27
Trav4d-3A0A075B625 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav4d-3A0A075B625 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav4d-3A0A075B625 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav4d-3A0A075B625 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav4d-3A0A075B625 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav4d-3A0A075B625 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav4d-3A0A075B625 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav4d-3A0A075B625 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trav4d-3A0A075B625 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav4d-3A0A075B625 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Trav4d-3A0A075B625 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav4d-3A0A075B625 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav4d-3A0A075B625 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav4d-3A0A075B625 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav4d-3A0A075B625 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav4d-3A0A075B625 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav4d-3A0A075B625 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav4d-3A0A075B625 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav4d-3A0A075B625 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav4d-3A0A075B625 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav4d-3A0A075B625 Gm10461-201ENSMUST00000202073 4786 ntBASIC13.35□□□□□ -0.27
Trav4d-3A0A075B625 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC13.35□□□□□ -0.27
Trav4d-3A0A075B625 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC13.35□□□□□ -0.27
Trav4d-3A0A075B625 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav4d-3A0A075B625 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav4d-3A0A075B625 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav4d-3A0A075B625 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Trav4d-3A0A075B625 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav4d-3A0A075B625 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav4d-3A0A075B625 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav4d-3A0A075B625 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav4d-3A0A075B625 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav4d-3A0A075B625 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC13.34□□□□□ -0.27
Trav4d-3A0A075B625 AC166356.1-201ENSMUST00000228236 1426 ntBASIC13.34□□□□□ -0.27
Trav4d-3A0A075B625 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav4d-3A0A075B625 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC13.34□□□□□ -0.27
Trav4d-3A0A075B625 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Trav4d-3A0A075B625 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC13.34□□□□□ -0.27
Trav4d-3A0A075B625 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav4d-3A0A075B625 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav4d-3A0A075B625 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Trav4d-3A0A075B625 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav4d-3A0A075B625 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC13.34□□□□□ -0.27
Trav4d-3A0A075B625 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav4d-3A0A075B625 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav4d-3A0A075B625 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav4d-3A0A075B625 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Trav4d-3A0A075B625 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trav4d-3A0A075B625 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC13.34□□□□□ -0.27
Trav4d-3A0A075B625 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav4d-3A0A075B625 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav4d-3A0A075B625 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav4d-3A0A075B625 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav4d-3A0A075B625 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav4d-3A0A075B625 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav4d-3A0A075B625 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav4d-3A0A075B625 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav4d-3A0A075B625 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav4d-3A0A075B625 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav4d-3A0A075B625 Gm6627-201ENSMUST00000218299 2386 ntBASIC13.32□□□□□ -0.28
Trav4d-3A0A075B625 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav4d-3A0A075B625 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav4d-3A0A075B625 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav4d-3A0A075B625 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav4d-3A0A075B625 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav4d-3A0A075B625 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav4d-3A0A075B625 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav4d-3A0A075B625 Gm6802-201ENSMUST00000167843 1983 ntBASIC13.32□□□□□ -0.28
Trav4d-3A0A075B625 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav4d-3A0A075B625 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trav4d-3A0A075B625 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav4d-3A0A075B625 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav4d-3A0A075B625 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav4d-3A0A075B625 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav4d-3A0A075B625 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav4d-3A0A075B625 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav4d-3A0A075B625 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav4d-3A0A075B625 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav4d-3A0A075B625 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav4d-3A0A075B625 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav4d-3A0A075B625 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav4d-3A0A075B625 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC13.31□□□□□ -0.28
Trav4d-3A0A075B625 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms