Protein–RNA interactions for Protein: A0A075B5W5

Ighv1-54, Immunoglobulin heavy variable V1-54 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-54A0A075B5W5 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ighv1-54A0A075B5W5 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ighv1-54A0A075B5W5 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Ighv1-54A0A075B5W5 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ighv1-54A0A075B5W5 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ighv1-54A0A075B5W5 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ighv1-54A0A075B5W5 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ighv1-54A0A075B5W5 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.57■□□□□ 0.4
Ighv1-54A0A075B5W5 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ighv1-54A0A075B5W5 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.57■□□□□ 0.4
Ighv1-54A0A075B5W5 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.57■□□□□ 0.4
Ighv1-54A0A075B5W5 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ighv1-54A0A075B5W5 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
Ighv1-54A0A075B5W5 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ighv1-54A0A075B5W5 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.56■□□□□ 0.4
Ighv1-54A0A075B5W5 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ighv1-54A0A075B5W5 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.56■□□□□ 0.4
Ighv1-54A0A075B5W5 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.56■□□□□ 0.4
Ighv1-54A0A075B5W5 Gm6139-201ENSMUST00000079261 882 ntBASIC17.56■□□□□ 0.4
Ighv1-54A0A075B5W5 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ighv1-54A0A075B5W5 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ighv1-54A0A075B5W5 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ighv1-54A0A075B5W5 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ighv1-54A0A075B5W5 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ighv1-54A0A075B5W5 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ighv1-54A0A075B5W5 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC17.55■□□□□ 0.4
Ighv1-54A0A075B5W5 Gm8493-201ENSMUST00000196881 489 ntBASIC17.55■□□□□ 0.4
Ighv1-54A0A075B5W5 Gm43173-201ENSMUST00000202246 593 ntBASIC17.55■□□□□ 0.4
Ighv1-54A0A075B5W5 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ighv1-54A0A075B5W5 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.55■□□□□ 0.4
Ighv1-54A0A075B5W5 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ighv1-54A0A075B5W5 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
Ighv1-54A0A075B5W5 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ighv1-54A0A075B5W5 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Ighv1-54A0A075B5W5 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ighv1-54A0A075B5W5 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Ighv1-54A0A075B5W5 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ighv1-54A0A075B5W5 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ighv1-54A0A075B5W5 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ighv1-54A0A075B5W5 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
Ighv1-54A0A075B5W5 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ighv1-54A0A075B5W5 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ighv1-54A0A075B5W5 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ighv1-54A0A075B5W5 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC17.53■□□□□ 0.4
Ighv1-54A0A075B5W5 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ighv1-54A0A075B5W5 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ighv1-54A0A075B5W5 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ighv1-54A0A075B5W5 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.52■□□□□ 0.4
Ighv1-54A0A075B5W5 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
Ighv1-54A0A075B5W5 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ighv1-54A0A075B5W5 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ighv1-54A0A075B5W5 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ighv1-54A0A075B5W5 Serp2-204ENSMUST00000228055 705 ntBASIC17.52■□□□□ 0.4
Ighv1-54A0A075B5W5 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ighv1-54A0A075B5W5 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ighv1-54A0A075B5W5 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ighv1-54A0A075B5W5 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.52■□□□□ 0.39
Ighv1-54A0A075B5W5 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ighv1-54A0A075B5W5 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ighv1-54A0A075B5W5 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ighv1-54A0A075B5W5 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.51■□□□□ 0.39
Ighv1-54A0A075B5W5 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.51■□□□□ 0.39
Ighv1-54A0A075B5W5 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Ighv1-54A0A075B5W5 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Ighv1-54A0A075B5W5 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ighv1-54A0A075B5W5 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC17.51■□□□□ 0.39
Ighv1-54A0A075B5W5 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ighv1-54A0A075B5W5 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.51■□□□□ 0.39
Ighv1-54A0A075B5W5 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Ighv1-54A0A075B5W5 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ighv1-54A0A075B5W5 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ighv1-54A0A075B5W5 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.51■□□□□ 0.39
Ighv1-54A0A075B5W5 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ighv1-54A0A075B5W5 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Ighv1-54A0A075B5W5 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ighv1-54A0A075B5W5 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ighv1-54A0A075B5W5 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ighv1-54A0A075B5W5 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ighv1-54A0A075B5W5 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ighv1-54A0A075B5W5 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ighv1-54A0A075B5W5 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ighv1-54A0A075B5W5 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ighv1-54A0A075B5W5 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Ighv1-54A0A075B5W5 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ighv1-54A0A075B5W5 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ighv1-54A0A075B5W5 Smad6-203ENSMUST00000179458 273 ntBASIC17.49■□□□□ 0.39
Ighv1-54A0A075B5W5 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ighv1-54A0A075B5W5 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ighv1-54A0A075B5W5 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ighv1-54A0A075B5W5 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ighv1-54A0A075B5W5 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ighv1-54A0A075B5W5 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ighv1-54A0A075B5W5 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Ighv1-54A0A075B5W5 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ighv1-54A0A075B5W5 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ighv1-54A0A075B5W5 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ighv1-54A0A075B5W5 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.48■□□□□ 0.39
Ighv1-54A0A075B5W5 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ighv1-54A0A075B5W5 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.48■□□□□ 0.39
Ighv1-54A0A075B5W5 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms