Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Rint1-203ENSMUST00000115113 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ptcd1Q8C2E4 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ptcd1Q8C2E4 Nrf1-203ENSMUST00000069831 1625 ntTSL 5 BASIC12.53□□□□□ -0.4
Ptcd1Q8C2E4 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ptcd1Q8C2E4 Crisp4-203ENSMUST00000115344 960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ptcd1Q8C2E4 Gm8216-201ENSMUST00000117232 601 ntBASIC12.53□□□□□ -0.4
Ptcd1Q8C2E4 Gm14138-201ENSMUST00000122061 745 ntBASIC12.53□□□□□ -0.4
Ptcd1Q8C2E4 Ccpg1os-201ENSMUST00000124565 711 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ptcd1Q8C2E4 Gm14617-201ENSMUST00000128053 798 ntTSL 5 BASIC12.53□□□□□ -0.4
Ptcd1Q8C2E4 Gm13839-201ENSMUST00000151639 506 ntTSL 2 BASIC12.53□□□□□ -0.4
Ptcd1Q8C2E4 A730090N16Rik-201ENSMUST00000160137 627 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ptcd1Q8C2E4 Sfta2-201ENSMUST00000171166 508 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ptcd1Q8C2E4 Zfp419-201ENSMUST00000173446 916 ntBASIC12.53□□□□□ -0.4
Ptcd1Q8C2E4 Gm6967-201ENSMUST00000182599 1007 ntBASIC12.53□□□□□ -0.4
Ptcd1Q8C2E4 4930517L18Rik-201ENSMUST00000191880 482 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ptcd1Q8C2E4 Gm6069-201ENSMUST00000196501 463 ntBASIC12.53□□□□□ -0.4
Ptcd1Q8C2E4 Gm43787-201ENSMUST00000197792 1037 ntBASIC12.53□□□□□ -0.4
Ptcd1Q8C2E4 Gm33024-201ENSMUST00000203143 633 ntTSL 3 BASIC12.53□□□□□ -0.4
Ptcd1Q8C2E4 Gm44709-201ENSMUST00000207649 448 ntTSL 5 BASIC12.53□□□□□ -0.4
Ptcd1Q8C2E4 AC116797.2-203ENSMUST00000225290 565 ntBASIC12.53□□□□□ -0.4
Ptcd1Q8C2E4 Fabp5-201ENSMUST00000029046 987 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ptcd1Q8C2E4 Ccr8-201ENSMUST00000048777 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ptcd1Q8C2E4 Olfr1466-201ENSMUST00000075868 933 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Ptcd1Q8C2E4 Smarca5-ps-201ENSMUST00000121843 3123 ntBASIC12.53□□□□□ -0.4
Ptcd1Q8C2E4 Gm40377-201ENSMUST00000204604 2015 ntBASIC12.53□□□□□ -0.4
Ptcd1Q8C2E4 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ptcd1Q8C2E4 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ptcd1Q8C2E4 AC140462.2-201ENSMUST00000225718 2433 ntBASIC12.53□□□□□ -0.4
Ptcd1Q8C2E4 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ptcd1Q8C2E4 Gm36957-201ENSMUST00000192982 2824 ntBASIC12.53□□□□□ -0.4
Ptcd1Q8C2E4 Mblac2-201ENSMUST00000057598 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ptcd1Q8C2E4 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ptcd1Q8C2E4 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ptcd1Q8C2E4 Gm42427-201ENSMUST00000200473 5292 ntBASIC12.53□□□□□ -0.4
Ptcd1Q8C2E4 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ptcd1Q8C2E4 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC12.53□□□□□ -0.4
Ptcd1Q8C2E4 Ephb4-202ENSMUST00000111054 3784 ntTSL 5 BASIC12.53□□□□□ -0.4
Ptcd1Q8C2E4 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ptcd1Q8C2E4 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC12.53□□□□□ -0.4
Ptcd1Q8C2E4 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Ptcd1Q8C2E4 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ptcd1Q8C2E4 Mfsd4a-201ENSMUST00000046658 3252 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ptcd1Q8C2E4 Atxn7l3-203ENSMUST00000107134 3712 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.4
Ptcd1Q8C2E4 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Ptcd1Q8C2E4 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ptcd1Q8C2E4 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ptcd1Q8C2E4 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Ptcd1Q8C2E4 Khdrbs2-204ENSMUST00000188257 5278 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ptcd1Q8C2E4 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ptcd1Q8C2E4 Car13-201ENSMUST00000029071 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ptcd1Q8C2E4 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ptcd1Q8C2E4 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ptcd1Q8C2E4 Gm5797-201ENSMUST00000100886 997 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ptcd1Q8C2E4 Ighv5-12-201ENSMUST00000103450 353 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Ptcd1Q8C2E4 Gm22661-201ENSMUST00000104192 132 ntBASIC12.52□□□□□ -0.41
Ptcd1Q8C2E4 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Ptcd1Q8C2E4 Gm3149-201ENSMUST00000112779 997 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Ptcd1Q8C2E4 Gm15539-201ENSMUST00000118452 566 ntBASIC12.52□□□□□ -0.41
Ptcd1Q8C2E4 Gm15570-201ENSMUST00000122093 625 ntBASIC12.52□□□□□ -0.41
Ptcd1Q8C2E4 Gm8817-201ENSMUST00000126769 693 ntTSL 2 BASIC12.52□□□□□ -0.41
Ptcd1Q8C2E4 Gm13844-201ENSMUST00000134541 581 ntTSL 3 BASIC12.52□□□□□ -0.41
Ptcd1Q8C2E4 Gm13799-201ENSMUST00000138883 838 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ptcd1Q8C2E4 Gm13629-201ENSMUST00000141149 1022 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ptcd1Q8C2E4 Tmem229b-ps-201ENSMUST00000168554 506 ntBASIC12.52□□□□□ -0.41
Ptcd1Q8C2E4 Gm8362-202ENSMUST00000170673 997 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Ptcd1Q8C2E4 Plut-201ENSMUST00000172461 855 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ptcd1Q8C2E4 Gm10045-201ENSMUST00000178657 483 ntBASIC12.52□□□□□ -0.41
Ptcd1Q8C2E4 Gm12424-201ENSMUST00000179673 447 ntBASIC12.52□□□□□ -0.41
Ptcd1Q8C2E4 Gm42516-201ENSMUST00000198691 767 ntBASIC12.52□□□□□ -0.41
Ptcd1Q8C2E4 Ift172-206ENSMUST00000201809 405 ntTSL 5 BASIC12.52□□□□□ -0.41
Ptcd1Q8C2E4 Gm44159-201ENSMUST00000204065 442 ntBASIC12.52□□□□□ -0.41
Ptcd1Q8C2E4 Gm31135-202ENSMUST00000208946 1155 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ptcd1Q8C2E4 Cyp2e1-203ENSMUST00000210235 1012 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ptcd1Q8C2E4 CT030194.1-201ENSMUST00000225507 532 ntBASIC12.52□□□□□ -0.41
Ptcd1Q8C2E4 Figla-201ENSMUST00000032070 759 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ptcd1Q8C2E4 Rnf212-201ENSMUST00000068946 288 ntTSL 5 BASIC12.52□□□□□ -0.41
Ptcd1Q8C2E4 Mgst2-201ENSMUST00000099106 603 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ptcd1Q8C2E4 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ptcd1Q8C2E4 AC122382.1-201ENSMUST00000225869 2371 ntBASIC12.52□□□□□ -0.41
Ptcd1Q8C2E4 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ptcd1Q8C2E4 4930578C19Rik-201ENSMUST00000044188 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ptcd1Q8C2E4 Cyp2b13-201ENSMUST00000005669 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ptcd1Q8C2E4 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ptcd1Q8C2E4 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ptcd1Q8C2E4 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ptcd1Q8C2E4 Bbs7-201ENSMUST00000040148 2599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ptcd1Q8C2E4 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ptcd1Q8C2E4 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ptcd1Q8C2E4 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ptcd1Q8C2E4 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ptcd1Q8C2E4 Rab7b-201ENSMUST00000064664 1672 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ptcd1Q8C2E4 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ptcd1Q8C2E4 Loxl3-202ENSMUST00000101257 3252 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ptcd1Q8C2E4 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ptcd1Q8C2E4 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ptcd1Q8C2E4 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ptcd1Q8C2E4 Rbm10-204ENSMUST00000115374 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ptcd1Q8C2E4 Avil-203ENSMUST00000129173 2925 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Ptcd1Q8C2E4 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ptcd1Q8C2E4 Gm3676-201ENSMUST00000111869 899 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms