Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trub1Q8C0D0 Ifnl3-201ENSMUST00000078364 582 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trub1Q8C0D0 Ncapg2-201ENSMUST00000084828 4684 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Trub1Q8C0D0 Olfr669-201ENSMUST00000098164 954 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Trub1Q8C0D0 Pla2g4a-201ENSMUST00000070200 2856 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trub1Q8C0D0 Nhsl1-202ENSMUST00000100054 6795 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Trub1Q8C0D0 Mid1-201ENSMUST00000036753 3753 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Trub1Q8C0D0 Adar-204ENSMUST00000118341 2399 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trub1Q8C0D0 Gm15204-201ENSMUST00000119454 2281 ntBASIC10.32□□□□□ -0.76
Trub1Q8C0D0 Arhgap12-201ENSMUST00000062584 2718 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Trub1Q8C0D0 Gm43517-201ENSMUST00000110746 3904 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
Trub1Q8C0D0 Galnt16-201ENSMUST00000021558 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trub1Q8C0D0 Olfr1495-203ENSMUST00000216980 2063 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Trub1Q8C0D0 Xpnpep2-203ENSMUST00000115000 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trub1Q8C0D0 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trub1Q8C0D0 Gm10608-201ENSMUST00000093527 2509 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Trub1Q8C0D0 Hmbox1-205ENSMUST00000176128 2958 ntAPPRIS ALT1 TSL 5 BASIC10.32□□□□□ -0.76
Trub1Q8C0D0 Dpy19l2-201ENSMUST00000133010 3442 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trub1Q8C0D0 AC164437.1-201ENSMUST00000227321 2308 ntBASIC10.32□□□□□ -0.76
Trub1Q8C0D0 Spty2d1-201ENSMUST00000061639 5223 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trub1Q8C0D0 Ccdc38-201ENSMUST00000092215 3656 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trub1Q8C0D0 Clasp2-203ENSMUST00000166734 4108 ntAPPRIS P3 TSL 5 BASIC10.31□□□□□ -0.76
Trub1Q8C0D0 Itih3-205ENSMUST00000227995 2100 ntAPPRIS ALT2 BASIC10.31□□□□□ -0.76
Trub1Q8C0D0 Loxhd1-201ENSMUST00000035501 3814 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trub1Q8C0D0 Zfp58-201ENSMUST00000076123 2391 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trub1Q8C0D0 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Trub1Q8C0D0 Olfr1511-202ENSMUST00000214168 1468 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Trub1Q8C0D0 Lrsam1-201ENSMUST00000028132 3981 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trub1Q8C0D0 Sipa1l1-210ENSMUST00000222714 6002 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trub1Q8C0D0 Esrp2-201ENSMUST00000115979 3536 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trub1Q8C0D0 Enox2-202ENSMUST00000114911 2623 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trub1Q8C0D0 Apobr-201ENSMUST00000039522 3685 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trub1Q8C0D0 Tomm40l-202ENSMUST00000111326 2753 ntTSL 5 BASIC10.31□□□□□ -0.76
Trub1Q8C0D0 Gm23255-201ENSMUST00000102244 110 ntBASIC10.31□□□□□ -0.76
Trub1Q8C0D0 S100a16-205ENSMUST00000107334 879 ntAPPRIS P1 TSL 3 BASIC10.31□□□□□ -0.76
Trub1Q8C0D0 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trub1Q8C0D0 Lemd1-201ENSMUST00000112357 964 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trub1Q8C0D0 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trub1Q8C0D0 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
Trub1Q8C0D0 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC10.31□□□□□ -0.76
Trub1Q8C0D0 Maats1os-201ENSMUST00000133496 326 ntTSL 3 BASIC10.31□□□□□ -0.76
Trub1Q8C0D0 Gm12154-201ENSMUST00000145584 445 ntTSL 5 BASIC10.31□□□□□ -0.76
Trub1Q8C0D0 Gm12847-201ENSMUST00000156219 413 ntTSL 5 BASIC10.31□□□□□ -0.76
Trub1Q8C0D0 Gm8955-201ENSMUST00000182945 1008 ntBASIC10.31□□□□□ -0.76
Trub1Q8C0D0 Gm42208-201ENSMUST00000198215 670 ntTSL 3 BASIC10.31□□□□□ -0.76
Trub1Q8C0D0 9230114K14Rik-202ENSMUST00000198720 837 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trub1Q8C0D0 Gm43480-201ENSMUST00000201201 416 ntBASIC10.31□□□□□ -0.76
Trub1Q8C0D0 AC161763.1-201ENSMUST00000227063 168 ntBASIC10.31□□□□□ -0.76
Trub1Q8C0D0 Sorbs1-221ENSMUST00000225786 2314 ntAPPRIS ALT2 BASIC10.31□□□□□ -0.76
Trub1Q8C0D0 Cptp-201ENSMUST00000030950 2662 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trub1Q8C0D0 Baiap3-201ENSMUST00000169109 3630 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Trub1Q8C0D0 Stoml3-201ENSMUST00000029307 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trub1Q8C0D0 Gal3st2b-202ENSMUST00000178757 2722 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trub1Q8C0D0 Sema4g-203ENSMUST00000179305 4290 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trub1Q8C0D0 Ncoa1-209ENSMUST00000220434 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trub1Q8C0D0 Polr3c-206ENSMUST00000154679 2406 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Trub1Q8C0D0 9530056K15Rik-201ENSMUST00000061947 2315 ntBASIC10.3□□□□□ -0.76
Trub1Q8C0D0 Kcnmb1-201ENSMUST00000020362 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trub1Q8C0D0 Habp2-202ENSMUST00000095948 2815 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trub1Q8C0D0 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Trub1Q8C0D0 Moxd2-201ENSMUST00000031937 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trub1Q8C0D0 Ptk2-209ENSMUST00000226988 4444 ntAPPRIS ALT1 BASIC10.3□□□□□ -0.76
Trub1Q8C0D0 Gm14858-201ENSMUST00000138614 1758 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trub1Q8C0D0 Gm14461-201ENSMUST00000067618 1780 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trub1Q8C0D0 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trub1Q8C0D0 Pms2-209ENSMUST00000148011 5482 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trub1Q8C0D0 Olfr31-201ENSMUST00000100872 954 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Trub1Q8C0D0 Gm11569-201ENSMUST00000105057 869 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Trub1Q8C0D0 Gm13094-201ENSMUST00000117930 409 ntBASIC10.3□□□□□ -0.76
Trub1Q8C0D0 Gm16209-201ENSMUST00000118457 627 ntBASIC10.3□□□□□ -0.76
Trub1Q8C0D0 Gm5257-201ENSMUST00000121823 790 ntBASIC10.3□□□□□ -0.76
Trub1Q8C0D0 Gm10171-201ENSMUST00000126220 628 ntBASIC10.3□□□□□ -0.76
Trub1Q8C0D0 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC10.3□□□□□ -0.76
Trub1Q8C0D0 Gm3687-201ENSMUST00000161710 460 ntBASIC10.3□□□□□ -0.76
Trub1Q8C0D0 Osgep-207ENSMUST00000162177 1219 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trub1Q8C0D0 Gm8425-201ENSMUST00000171395 769 ntBASIC10.3□□□□□ -0.76
Trub1Q8C0D0 Map1lc3b-205ENSMUST00000181948 766 ntTSL 2 BASIC10.3□□□□□ -0.76
Trub1Q8C0D0 Gm5259-201ENSMUST00000191231 800 ntBASIC10.3□□□□□ -0.76
Trub1Q8C0D0 Gm9916-201ENSMUST00000192943 1228 ntBASIC10.3□□□□□ -0.76
Trub1Q8C0D0 Gm42689-201ENSMUST00000202403 404 ntBASIC10.3□□□□□ -0.76
Trub1Q8C0D0 Gm7924-201ENSMUST00000203975 785 ntBASIC10.3□□□□□ -0.76
Trub1Q8C0D0 Gm3912-202ENSMUST00000210164 643 ntTSL 3 BASIC10.3□□□□□ -0.76
Trub1Q8C0D0 Gm32098-201ENSMUST00000211305 479 ntTSL 5 BASIC10.3□□□□□ -0.76
Trub1Q8C0D0 Gm3889-201ENSMUST00000212467 612 ntBASIC10.3□□□□□ -0.76
Trub1Q8C0D0 CT009721.1-201ENSMUST00000213590 770 ntTSL 5 BASIC10.3□□□□□ -0.76
Trub1Q8C0D0 Gm26861-207ENSMUST00000223253 1095 ntTSL 5 BASIC10.3□□□□□ -0.76
Trub1Q8C0D0 CT025642.1-201ENSMUST00000224734 1219 ntBASIC10.3□□□□□ -0.76
Trub1Q8C0D0 Opn1mw-201ENSMUST00000033771 1227 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trub1Q8C0D0 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Trub1Q8C0D0 Gm10233-201ENSMUST00000089275 628 ntBASIC10.3□□□□□ -0.76
Trub1Q8C0D0 Glyctk-201ENSMUST00000036382 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trub1Q8C0D0 Lct-201ENSMUST00000073490 6174 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
Trub1Q8C0D0 Ap1m2-202ENSMUST00000115433 2586 ntAPPRIS ALT1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trub1Q8C0D0 Nr1i2-201ENSMUST00000023504 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trub1Q8C0D0 Gm15663-201ENSMUST00000145794 3200 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trub1Q8C0D0 Acan-201ENSMUST00000032835 7355 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trub1Q8C0D0 Btn2a2-202ENSMUST00000110432 2089 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trub1Q8C0D0 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC10.3□□□□□ -0.76
Trub1Q8C0D0 Pfkfb2-210ENSMUST00000189167 1558 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trub1Q8C0D0 Gm28533-202ENSMUST00000190106 1346 ntTSL 5 BASIC10.3□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms