Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Sms-201ENSMUST00000112529 3717 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Sec61a2Q9JLR1 Timm9-208ENSMUST00000221797 2564 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Sec61a2Q9JLR1 Nek5-201ENSMUST00000169834 2404 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Sec61a2Q9JLR1 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC9.09□□□□□ -0.95
Sec61a2Q9JLR1 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Sec61a2Q9JLR1 Defb48-201ENSMUST00000100493 445 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Sec61a2Q9JLR1 Gm11502-201ENSMUST00000120917 1211 ntBASIC9.09□□□□□ -0.95
Sec61a2Q9JLR1 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC9.09□□□□□ -0.95
Sec61a2Q9JLR1 Rnasek-203ENSMUST00000141880 465 ntTSL 2 BASIC9.09□□□□□ -0.95
Sec61a2Q9JLR1 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC9.09□□□□□ -0.95
Sec61a2Q9JLR1 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC9.09□□□□□ -0.95
Sec61a2Q9JLR1 Gm6606-201ENSMUST00000193613 947 ntBASIC9.09□□□□□ -0.95
Sec61a2Q9JLR1 Gm42617-201ENSMUST00000197640 1229 ntBASIC9.09□□□□□ -0.95
Sec61a2Q9JLR1 Ghrl-205ENSMUST00000204163 447 ntAPPRIS ALT1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Sec61a2Q9JLR1 AC100406.1-201ENSMUST00000217305 480 ntBASIC9.09□□□□□ -0.95
Sec61a2Q9JLR1 Gm3791-201ENSMUST00000220790 768 ntBASIC9.09□□□□□ -0.95
Sec61a2Q9JLR1 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC9.09□□□□□ -0.95
Sec61a2Q9JLR1 AU017674-201ENSMUST00000222864 720 ntTSL 3 BASIC9.09□□□□□ -0.95
Sec61a2Q9JLR1 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Sec61a2Q9JLR1 AC154683.1-201ENSMUST00000228409 1284 ntBASIC9.09□□□□□ -0.95
Sec61a2Q9JLR1 Calm4-201ENSMUST00000042219 917 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Sec61a2Q9JLR1 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Sec61a2Q9JLR1 Rps3a2-201ENSMUST00000074245 792 ntBASIC9.09□□□□□ -0.95
Sec61a2Q9JLR1 Tbata-202ENSMUST00000079235 696 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Sec61a2Q9JLR1 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Sec61a2Q9JLR1 Gm10238-201ENSMUST00000089689 408 ntBASIC9.09□□□□□ -0.95
Sec61a2Q9JLR1 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Sec61a2Q9JLR1 Mrps14-202ENSMUST00000097193 787 ntTSL 2 BASIC9.09□□□□□ -0.95
Sec61a2Q9JLR1 Hmgb1-201ENSMUST00000085546 2838 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Sec61a2Q9JLR1 Ik-201ENSMUST00000007042 1996 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Sec61a2Q9JLR1 Mkl1-203ENSMUST00000131235 4222 ntTSL 5 BASIC9.09□□□□□ -0.95
Sec61a2Q9JLR1 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Sec61a2Q9JLR1 Cd22-213ENSMUST00000190617 3230 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Sec61a2Q9JLR1 Park2-209ENSMUST00000191124 3202 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Sec61a2Q9JLR1 Dnm3-201ENSMUST00000070330 4601 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Sec61a2Q9JLR1 Efna5-201ENSMUST00000076840 4032 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Sec61a2Q9JLR1 Dsg1a-201ENSMUST00000077146 5686 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Sec61a2Q9JLR1 Pantr1-208ENSMUST00000181660 2085 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Sec61a2Q9JLR1 Ints10-204ENSMUST00000110242 4250 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Sec61a2Q9JLR1 Gm12716-201ENSMUST00000120606 1354 ntBASIC9.09□□□□□ -0.95
Sec61a2Q9JLR1 Numb-210ENSMUST00000154043 1929 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Sec61a2Q9JLR1 Arnt2-207ENSMUST00000208232 6047 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Sec61a2Q9JLR1 Slc18a2-201ENSMUST00000026084 3803 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Sec61a2Q9JLR1 Rab11fip3-201ENSMUST00000118828 3271 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Sec61a2Q9JLR1 Tecpr2-202ENSMUST00000169597 7780 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Sec61a2Q9JLR1 CT025639.2-202ENSMUST00000225298 1630 ntBASIC9.09□□□□□ -0.95
Sec61a2Q9JLR1 Bpifb1-201ENSMUST00000028987 1637 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Sec61a2Q9JLR1 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC9.09□□□□□ -0.95
Sec61a2Q9JLR1 Tal2-201ENSMUST00000030124 2971 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Sec61a2Q9JLR1 Acsl6-203ENSMUST00000072178 2432 ntAPPRIS P5 TSL 5 BASIC9.09□□□□□ -0.96
Sec61a2Q9JLR1 Zeb2-214ENSMUST00000177302 4020 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Sec61a2Q9JLR1 Nsd3-201ENSMUST00000084026 9945 ntAPPRIS P2 TSL 2 BASIC9.08□□□□□ -0.96
Sec61a2Q9JLR1 Fndc7-202ENSMUST00000102620 3477 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Sec61a2Q9JLR1 Fgf6-201ENSMUST00000000187 4657 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Sec61a2Q9JLR1 Sun1-201ENSMUST00000058716 4134 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Sec61a2Q9JLR1 Adcy6-205ENSMUST00000228566 3707 ntAPPRIS ALT1 BASIC9.08□□□□□ -0.96
Sec61a2Q9JLR1 4631405J19Rik-202ENSMUST00000111270 2909 ntTSL 2 BASIC9.08□□□□□ -0.96
Sec61a2Q9JLR1 Gm42941-201ENSMUST00000200347 1321 ntBASIC9.08□□□□□ -0.96
Sec61a2Q9JLR1 Qrich2-204ENSMUST00000208602 7260 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Sec61a2Q9JLR1 Erc2-201ENSMUST00000090302 6083 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Sec61a2Q9JLR1 Slco5a1-205ENSMUST00000146763 3437 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Sec61a2Q9JLR1 Myo1a-201ENSMUST00000079590 3439 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Sec61a2Q9JLR1 Gprin2-203ENSMUST00000226613 10354 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Sec61a2Q9JLR1 4930517J16Rik-201ENSMUST00000193095 1568 ntBASIC9.08□□□□□ -0.96
Sec61a2Q9JLR1 Smyd1-202ENSMUST00000114186 3292 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Sec61a2Q9JLR1 Pde9a-206ENSMUST00000134525 1818 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Sec61a2Q9JLR1 Gm8446-201ENSMUST00000188834 2712 ntBASIC9.08□□□□□ -0.96
Sec61a2Q9JLR1 Slf2-201ENSMUST00000096053 6880 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Sec61a2Q9JLR1 Luc7l-202ENSMUST00000114976 4934 ntAPPRIS P4 TSL 1 (best) BASIC9.08□□□□□ -0.96
Sec61a2Q9JLR1 Myh4-202ENSMUST00000170942 5912 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Sec61a2Q9JLR1 Rfx6-202ENSMUST00000122922 3464 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Sec61a2Q9JLR1 Epc1-201ENSMUST00000028100 3965 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Sec61a2Q9JLR1 Tmem150c-201ENSMUST00000063192 3084 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Sec61a2Q9JLR1 Mmgt1-201ENSMUST00000059899 4234 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Sec61a2Q9JLR1 Gm12461-201ENSMUST00000120231 1239 ntBASIC9.08□□□□□ -0.96
Sec61a2Q9JLR1 Gm6441-201ENSMUST00000120983 696 ntBASIC9.08□□□□□ -0.96
Sec61a2Q9JLR1 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Sec61a2Q9JLR1 Gm12737-201ENSMUST00000142835 725 ntTSL 5 BASIC9.08□□□□□ -0.96
Sec61a2Q9JLR1 Aif1l-207ENSMUST00000148056 670 ntTSL 5 BASIC9.08□□□□□ -0.96
Sec61a2Q9JLR1 Erg-209ENSMUST00000177450 1280 ntTSL 5 BASIC9.08□□□□□ -0.96
Sec61a2Q9JLR1 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Sec61a2Q9JLR1 Gm9916-201ENSMUST00000192943 1228 ntBASIC9.08□□□□□ -0.96
Sec61a2Q9JLR1 Gm43821-201ENSMUST00000199198 729 ntTSL 3 BASIC9.08□□□□□ -0.96
Sec61a2Q9JLR1 1700012J15Rik-201ENSMUST00000203458 471 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Sec61a2Q9JLR1 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC9.08□□□□□ -0.96
Sec61a2Q9JLR1 Chac2-201ENSMUST00000020553 1018 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Sec61a2Q9JLR1 AC134439.3-201ENSMUST00000223486 851 ntTSL 5 BASIC9.08□□□□□ -0.96
Sec61a2Q9JLR1 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC9.08□□□□□ -0.96
Sec61a2Q9JLR1 AC101205.2-201ENSMUST00000226206 715 ntBASIC9.08□□□□□ -0.96
Sec61a2Q9JLR1 Hmgb4-201ENSMUST00000053830 746 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Sec61a2Q9JLR1 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Sec61a2Q9JLR1 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Sec61a2Q9JLR1 Gm8325-201ENSMUST00000099086 453 ntBASIC9.08□□□□□ -0.96
Sec61a2Q9JLR1 Gm6727-201ENSMUST00000204102 1518 ntBASIC9.08□□□□□ -0.96
Sec61a2Q9JLR1 AC110091.2-201ENSMUST00000215107 1512 ntTSL 5 BASIC9.08□□□□□ -0.96
Sec61a2Q9JLR1 Osbpl1a-204ENSMUST00000119043 2522 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Sec61a2Q9JLR1 Enah-211ENSMUST00000193703 11229 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Sec61a2Q9JLR1 Mbnl1-203ENSMUST00000191747 4046 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Sec61a2Q9JLR1 Itgam-203ENSMUST00000106242 4649 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Sec61a2Q9JLR1 Hnrnpk-216ENSMUST00000177019 2626 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms