Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Arfgap3-201ENSMUST00000067215 2619 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Clrn1Q8K445 Ppip5k1-203ENSMUST00000110626 5171 ntAPPRIS P2 TSL 5 BASIC9.49□□□□□ -0.89
Clrn1Q8K445 Fbxw11-202ENSMUST00000093205 3938 ntAPPRIS P4 TSL 1 (best) BASIC9.49□□□□□ -0.89
Clrn1Q8K445 Sdhc-202ENSMUST00000111336 3171 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Clrn1Q8K445 Zfp658-201ENSMUST00000005597 2664 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Clrn1Q8K445 G6pc-201ENSMUST00000019469 2414 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Clrn1Q8K445 Entpd8-202ENSMUST00000114376 1942 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Clrn1Q8K445 Cd22-213ENSMUST00000190617 3230 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Clrn1Q8K445 Wwtr1-202ENSMUST00000120977 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Clrn1Q8K445 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC9.48□□□□□ -0.89
Clrn1Q8K445 Zeb2-214ENSMUST00000177302 4020 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Clrn1Q8K445 4933413C19Rik-201ENSMUST00000162380 2217 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Clrn1Q8K445 Upb1-201ENSMUST00000039925 3042 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Clrn1Q8K445 Mov10-203ENSMUST00000106775 3584 ntTSL 5 BASIC9.48□□□□□ -0.89
Clrn1Q8K445 Mov10-206ENSMUST00000166979 3584 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Clrn1Q8K445 5430434F05Rik-201ENSMUST00000206080 3553 ntBASIC9.48□□□□□ -0.89
Clrn1Q8K445 5730422E09Rik-201ENSMUST00000180733 1740 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Clrn1Q8K445 Zfp873-203ENSMUST00000209622 2284 ntTSL 2 BASIC9.48□□□□□ -0.89
Clrn1Q8K445 Kirrel3-208ENSMUST00000188933 3643 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Clrn1Q8K445 Aasdhppt-201ENSMUST00000051589 2843 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Clrn1Q8K445 Myo7a-202ENSMUST00000107122 6867 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Clrn1Q8K445 Cacna1c-206ENSMUST00000185345 6579 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Clrn1Q8K445 Strip2-202ENSMUST00000115224 3524 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Clrn1Q8K445 Gm24981-201ENSMUST00000104459 132 ntBASIC9.48□□□□□ -0.89
Clrn1Q8K445 Atp5g3-202ENSMUST00000111996 723 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
Clrn1Q8K445 Gm13197-201ENSMUST00000117204 225 ntBASIC9.48□□□□□ -0.89
Clrn1Q8K445 Gm11979-201ENSMUST00000119629 743 ntBASIC9.48□□□□□ -0.89
Clrn1Q8K445 Gm13204-201ENSMUST00000120110 821 ntBASIC9.48□□□□□ -0.89
Clrn1Q8K445 Gm8152-201ENSMUST00000120842 637 ntBASIC9.48□□□□□ -0.89
Clrn1Q8K445 Gm15982-201ENSMUST00000121681 554 ntBASIC9.48□□□□□ -0.89
Clrn1Q8K445 Gm11513-201ENSMUST00000138855 751 ntTSL 5 BASIC9.48□□□□□ -0.89
Clrn1Q8K445 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC9.48□□□□□ -0.89
Clrn1Q8K445 Gm17226-201ENSMUST00000166637 780 ntTSL 3 BASIC9.48□□□□□ -0.89
Clrn1Q8K445 Ube2i-214ENSMUST00000174216 1144 ntTSL 2 BASIC9.48□□□□□ -0.89
Clrn1Q8K445 Gm28391-201ENSMUST00000185202 379 ntBASIC9.48□□□□□ -0.89
Clrn1Q8K445 Gm18443-201ENSMUST00000185358 556 ntBASIC9.48□□□□□ -0.89
Clrn1Q8K445 Gm29528-201ENSMUST00000186699 379 ntBASIC9.48□□□□□ -0.89
Clrn1Q8K445 Gm29526-201ENSMUST00000187217 379 ntBASIC9.48□□□□□ -0.89
Clrn1Q8K445 Gm28722-201ENSMUST00000187630 1036 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Clrn1Q8K445 Gm37207-201ENSMUST00000194284 296 ntBASIC9.48□□□□□ -0.89
Clrn1Q8K445 Gm37921-201ENSMUST00000194333 695 ntBASIC9.48□□□□□ -0.89
Clrn1Q8K445 Gm38191-201ENSMUST00000194509 770 ntTSL 5 BASIC9.48□□□□□ -0.89
Clrn1Q8K445 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC9.48□□□□□ -0.89
Clrn1Q8K445 Gm35611-201ENSMUST00000205323 799 ntTSL 3 BASIC9.48□□□□□ -0.89
Clrn1Q8K445 Gm45094-201ENSMUST00000207013 617 ntBASIC9.48□□□□□ -0.89
Clrn1Q8K445 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC9.48□□□□□ -0.89
Clrn1Q8K445 Gm19090-201ENSMUST00000218187 774 ntBASIC9.48□□□□□ -0.89
Clrn1Q8K445 AC165092.1-201ENSMUST00000224018 486 ntBASIC9.48□□□□□ -0.89
Clrn1Q8K445 AC154766.1-201ENSMUST00000226550 936 ntBASIC9.48□□□□□ -0.89
Clrn1Q8K445 Mptx1-201ENSMUST00000027816 799 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Clrn1Q8K445 Ggta1-201ENSMUST00000044255 1221 ntAPPRIS P3 TSL 5 BASIC9.48□□□□□ -0.89
Clrn1Q8K445 Gemin6-201ENSMUST00000069486 1134 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Clrn1Q8K445 Atp6v0a4-201ENSMUST00000040259 3285 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Clrn1Q8K445 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Clrn1Q8K445 Gm26614-201ENSMUST00000180386 3909 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Clrn1Q8K445 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Clrn1Q8K445 Plxdc2-201ENSMUST00000028081 6947 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Clrn1Q8K445 Ankrd46-201ENSMUST00000057486 2509 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Clrn1Q8K445 Tubgcp5-205ENSMUST00000205796 3448 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Clrn1Q8K445 Pip5k1a-201ENSMUST00000005768 3480 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Clrn1Q8K445 Elmo3-201ENSMUST00000109375 3189 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Clrn1Q8K445 Rabep1-206ENSMUST00000177731 3167 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Clrn1Q8K445 Cct8l1-201ENSMUST00000045016 1961 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Clrn1Q8K445 Ces1a-201ENSMUST00000095211 1980 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Clrn1Q8K445 Cyp51-201ENSMUST00000001507 3931 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Clrn1Q8K445 Gm8094-201ENSMUST00000165136 1408 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Clrn1Q8K445 H2-M10.4-201ENSMUST00000057502 1410 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Clrn1Q8K445 Ilf3-213ENSMUST00000216892 3684 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Clrn1Q8K445 Npnt-205ENSMUST00000117456 3383 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Clrn1Q8K445 Hmbox1-201ENSMUST00000022544 3396 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Clrn1Q8K445 Trim69-201ENSMUST00000036089 1758 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Clrn1Q8K445 Capn8-201ENSMUST00000048941 2406 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Clrn1Q8K445 Odf2-205ENSMUST00000113757 3082 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Clrn1Q8K445 Cdc25b-201ENSMUST00000028804 3089 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Clrn1Q8K445 Itga10-202ENSMUST00000119365 5035 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Clrn1Q8K445 Ift172-201ENSMUST00000041565 5403 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Clrn1Q8K445 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Clrn1Q8K445 Tomm40l-203ENSMUST00000111327 2812 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Clrn1Q8K445 Cdk12-201ENSMUST00000003203 4837 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Clrn1Q8K445 Dysf-204ENSMUST00000113821 6803 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Clrn1Q8K445 Tmprss2-201ENSMUST00000000395 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Clrn1Q8K445 Gm38048-201ENSMUST00000193778 2174 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Clrn1Q8K445 Spata7-202ENSMUST00000101144 1541 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Clrn1Q8K445 Fga-202ENSMUST00000166581 2587 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Clrn1Q8K445 Nox1-204ENSMUST00000159259 1581 ntTSL 5 BASIC9.47□□□□□ -0.89
Clrn1Q8K445 Bcor-201ENSMUST00000043441 6113 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Clrn1Q8K445 Brca2-201ENSMUST00000044620 10724 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Clrn1Q8K445 Ins2-202ENSMUST00000105930 583 ntTSL 3 BASIC9.47□□□□□ -0.89
Clrn1Q8K445 Wfdc3-202ENSMUST00000109328 726 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Clrn1Q8K445 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC9.47□□□□□ -0.89
Clrn1Q8K445 Gm12168-201ENSMUST00000119051 368 ntBASIC9.47□□□□□ -0.89
Clrn1Q8K445 Gm15793-201ENSMUST00000121857 495 ntBASIC9.47□□□□□ -0.89
Clrn1Q8K445 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Clrn1Q8K445 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC9.47□□□□□ -0.89
Clrn1Q8K445 St8sia3os-204ENSMUST00000140903 383 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Clrn1Q8K445 2310026L22Rik-201ENSMUST00000146658 400 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Clrn1Q8K445 Mir432-201ENSMUST00000157230 75 ntBASIC9.47□□□□□ -0.89
Clrn1Q8K445 Gm23757-201ENSMUST00000158353 100 ntBASIC9.47□□□□□ -0.89
Clrn1Q8K445 Gm17120-201ENSMUST00000164734 743 ntTSL 3 BASIC9.47□□□□□ -0.89
Clrn1Q8K445 Gm17058-201ENSMUST00000168951 928 ntTSL 5 BASIC9.47□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms