Protein–RNA interactions for Protein: P04104

Krt1, Keratin, type II cytoskeletal 1, mousemouse

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt1P04104 Patj-205ENSMUST00000107030 2104 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Krt1P04104 Prpf6-201ENSMUST00000002529 3054 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Krt1P04104 Stx17-203ENSMUST00000107721 1771 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Krt1P04104 Fam114a2-202ENSMUST00000108850 1765 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Krt1P04104 Dkk3-201ENSMUST00000033036 3359 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Krt1P04104 Cacna1c-220ENSMUST00000189520 6570 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.91
Krt1P04104 Chd8-201ENSMUST00000089752 8190 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Krt1P04104 Fgf13-202ENSMUST00000119306 2091 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Krt1P04104 Adam22-206ENSMUST00000115386 9056 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Krt1P04104 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Krt1P04104 Ubxn2b-201ENSMUST00000029907 6642 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Krt1P04104 Slc1a1-201ENSMUST00000025875 3800 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Krt1P04104 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Krt1P04104 AC132833.1-202ENSMUST00000228875 1690 ntBASIC9.39□□□□□ -0.91
Krt1P04104 Dync1i2-206ENSMUST00000112140 2573 ntAPPRIS ALT1 TSL 5 BASIC9.39□□□□□ -0.91
Krt1P04104 Ttc41-205ENSMUST00000219108 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Krt1P04104 Lypd5-201ENSMUST00000032683 2239 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Krt1P04104 Ttll2-201ENSMUST00000115747 1623 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Krt1P04104 Nrf1-203ENSMUST00000069831 1625 ntTSL 5 BASIC9.39□□□□□ -0.91
Krt1P04104 Cd22-210ENSMUST00000189718 3672 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Krt1P04104 Olfr173-202ENSMUST00000206205 2778 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
Krt1P04104 Tsc1-203ENSMUST00000113869 7702 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Krt1P04104 Hsd3b1-202ENSMUST00000107016 1855 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Krt1P04104 Drc3-203ENSMUST00000108722 1858 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Krt1P04104 Cyp2b9-201ENSMUST00000082214 1876 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Krt1P04104 Gm4915-201ENSMUST00000121909 1569 ntBASIC9.39□□□□□ -0.91
Krt1P04104 Col12a1-201ENSMUST00000071750 11511 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Krt1P04104 Pfkp-207ENSMUST00000138703 4145 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Krt1P04104 Ola1-202ENSMUST00000100015 905 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Krt1P04104 Igkv3-9-201ENSMUST00000103398 359 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Krt1P04104 Prokr2-202ENSMUST00000110156 3829 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Krt1P04104 Gm14942-201ENSMUST00000119642 336 ntBASIC9.39□□□□□ -0.91
Krt1P04104 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC9.39□□□□□ -0.91
Krt1P04104 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Krt1P04104 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC9.39□□□□□ -0.91
Krt1P04104 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Krt1P04104 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC9.39□□□□□ -0.91
Krt1P04104 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC9.39□□□□□ -0.91
Krt1P04104 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Krt1P04104 Gm20394-201ENSMUST00000173304 942 ntTSL 5 BASIC9.39□□□□□ -0.91
Krt1P04104 Gm2260-201ENSMUST00000184965 657 ntBASIC9.39□□□□□ -0.91
Krt1P04104 Gm42915-201ENSMUST00000197478 323 ntBASIC9.39□□□□□ -0.91
Krt1P04104 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Krt1P04104 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC9.39□□□□□ -0.91
Krt1P04104 Sfmbt1-204ENSMUST00000227303 2960 ntBASIC9.39□□□□□ -0.91
Krt1P04104 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Krt1P04104 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Krt1P04104 Gm10053-201ENSMUST00000073080 949 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Krt1P04104 Snx25-201ENSMUST00000041582 3206 ntAPPRIS P2 TSL 5 BASIC9.39□□□□□ -0.91
Krt1P04104 Gm5310-201ENSMUST00000197861 1511 ntBASIC9.39□□□□□ -0.91
Krt1P04104 Gm42822-201ENSMUST00000200507 1529 ntBASIC9.39□□□□□ -0.91
Krt1P04104 Med12-202ENSMUST00000087956 6746 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Krt1P04104 Slc2a9-202ENSMUST00000067872 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Krt1P04104 Ncam1-204ENSMUST00000193547 6050 ntAPPRIS P4 TSL 1 (best) BASIC9.39□□□□□ -0.91
Krt1P04104 Ccdc187-203ENSMUST00000227200 9528 ntAPPRIS ALT2 BASIC9.39□□□□□ -0.91
Krt1P04104 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Krt1P04104 Tomt-201ENSMUST00000106969 2796 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Krt1P04104 Gm43532-201ENSMUST00000199389 3816 ntBASIC9.39□□□□□ -0.91
Krt1P04104 Dpysl3-202ENSMUST00000118043 1986 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Krt1P04104 Zc3h10-201ENSMUST00000040572 3721 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Krt1P04104 Ambra1-202ENSMUST00000045705 5203 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Krt1P04104 Slc39a9-201ENSMUST00000085245 5201 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Krt1P04104 Gm37813-201ENSMUST00000195003 3695 ntBASIC9.38□□□□□ -0.91
Krt1P04104 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Krt1P04104 Gm38227-201ENSMUST00000193036 1602 ntBASIC9.38□□□□□ -0.91
Krt1P04104 Echdc3-201ENSMUST00000042658 1851 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Krt1P04104 Micalcl-202ENSMUST00000051308 2399 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Krt1P04104 Gm20236-201ENSMUST00000193037 4540 ntBASIC9.38□□□□□ -0.91
Krt1P04104 Gm37094-201ENSMUST00000193352 4540 ntBASIC9.38□□□□□ -0.91
Krt1P04104 Agxt2-201ENSMUST00000022858 1825 ntTSL 2 BASIC9.38□□□□□ -0.91
Krt1P04104 Mgl2-201ENSMUST00000041550 1586 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Krt1P04104 AC121860.1-201ENSMUST00000227908 2787 ntBASIC9.38□□□□□ -0.91
Krt1P04104 Ctsll3-201ENSMUST00000043754 1337 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Krt1P04104 Smoc1-202ENSMUST00000110347 3496 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Krt1P04104 Trpc7-201ENSMUST00000022023 3483 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Krt1P04104 Gm8049-201ENSMUST00000214336 1782 ntBASIC9.38□□□□□ -0.91
Krt1P04104 Rtp3-203ENSMUST00000199891 2463 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Krt1P04104 Cts7-201ENSMUST00000021892 1518 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Krt1P04104 Tmem248-201ENSMUST00000065329 3607 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Krt1P04104 4932438H23Rik-201ENSMUST00000035689 2684 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Krt1P04104 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Krt1P04104 Gm11489-201ENSMUST00000118342 499 ntBASIC9.38□□□□□ -0.91
Krt1P04104 Gm15373-201ENSMUST00000121495 214 ntBASIC9.38□□□□□ -0.91
Krt1P04104 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC9.38□□□□□ -0.91
Krt1P04104 Gm12688-201ENSMUST00000136525 701 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Krt1P04104 Gm11513-201ENSMUST00000138855 751 ntTSL 5 BASIC9.38□□□□□ -0.91
Krt1P04104 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC9.38□□□□□ -0.91
Krt1P04104 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC9.38□□□□□ -0.91
Krt1P04104 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Krt1P04104 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC9.38□□□□□ -0.91
Krt1P04104 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC9.38□□□□□ -0.91
Krt1P04104 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC9.38□□□□□ -0.91
Krt1P04104 Gm28415-201ENSMUST00000187528 452 ntTSL 2 BASIC9.38□□□□□ -0.91
Krt1P04104 Mir7686-201ENSMUST00000200604 57 ntBASIC9.38□□□□□ -0.91
Krt1P04104 Gm6342-201ENSMUST00000204344 766 ntBASIC9.38□□□□□ -0.91
Krt1P04104 Gm45186-201ENSMUST00000206874 478 ntBASIC9.38□□□□□ -0.91
Krt1P04104 Gm44814-201ENSMUST00000207018 434 ntBASIC9.38□□□□□ -0.91
Krt1P04104 Gm45331-201ENSMUST00000209868 554 ntBASIC9.38□□□□□ -0.91
Krt1P04104 AC164618.2-201ENSMUST00000224770 573 ntBASIC9.38□□□□□ -0.91
Krt1P04104 Dusp3-201ENSMUST00000003612 4212 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms