Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Ccdc188F6WEU2 AC140299.1-201ENSMUST00000217855 1510 ntBASIC10.19□□□□□ -0.78
Ccdc188F6WEU2 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Ccdc188F6WEU2 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ccdc188F6WEU2 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ccdc188F6WEU2 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ccdc188F6WEU2 Mtfr1-203ENSMUST00000119865 1367 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ccdc188F6WEU2 Fcgr3-201ENSMUST00000164044 1347 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ccdc188F6WEU2 Fcgr3-204ENSMUST00000169017 1324 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ccdc188F6WEU2 Lyz2-201ENSMUST00000092163 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ccdc188F6WEU2 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Ccdc188F6WEU2 Hist1h4f-201ENSMUST00000102971 391 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Ccdc188F6WEU2 Hist1h4h-201ENSMUST00000102972 470 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Ccdc188F6WEU2 Mif-ps3-201ENSMUST00000118636 345 ntBASIC10.19□□□□□ -0.78
Ccdc188F6WEU2 Gm12508-201ENSMUST00000121282 480 ntBASIC10.19□□□□□ -0.78
Ccdc188F6WEU2 Gm4772-201ENSMUST00000122221 843 ntBASIC10.19□□□□□ -0.78
Ccdc188F6WEU2 Gm11399-201ENSMUST00000131021 324 ntTSL 5 BASIC10.19□□□□□ -0.78
Ccdc188F6WEU2 4930599N23Rik-201ENSMUST00000146981 880 ntTSL 2 BASIC10.19□□□□□ -0.78
Ccdc188F6WEU2 Gm11431-201ENSMUST00000155046 428 ntTSL 3 BASIC10.19□□□□□ -0.78
Ccdc188F6WEU2 Pax4-205ENSMUST00000174194 974 ntTSL 5 BASIC10.19□□□□□ -0.78
Ccdc188F6WEU2 Vmn1r-ps147-201ENSMUST00000177028 513 ntBASIC10.19□□□□□ -0.78
Ccdc188F6WEU2 D330041H03Rik-203ENSMUST00000180579 605 ntTSL 5 BASIC10.19□□□□□ -0.78
Ccdc188F6WEU2 Gm5266-201ENSMUST00000187302 1162 ntBASIC10.19□□□□□ -0.78
Ccdc188F6WEU2 1110002O04Rik-201ENSMUST00000194261 566 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Ccdc188F6WEU2 Gm43049-201ENSMUST00000198099 462 ntTSL 3 BASIC10.19□□□□□ -0.78
Ccdc188F6WEU2 Gm18873-201ENSMUST00000219517 1045 ntBASIC10.19□□□□□ -0.78
Ccdc188F6WEU2 CT009546.3-201ENSMUST00000220914 208 ntBASIC10.19□□□□□ -0.78
Ccdc188F6WEU2 Gm5407-201ENSMUST00000080694 747 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Ccdc188F6WEU2 Gm7275-201ENSMUST00000088296 744 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Ccdc188F6WEU2 Snora57-201ENSMUST00000093658 148 ntBASIC10.19□□□□□ -0.78
Ccdc188F6WEU2 Fxyd5-201ENSMUST00000009831 803 ntAPPRIS ALT2 TSL 3 BASIC10.19□□□□□ -0.78
Ccdc188F6WEU2 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ccdc188F6WEU2 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ccdc188F6WEU2 Gm43817-201ENSMUST00000196459 2262 ntBASIC10.19□□□□□ -0.78
Ccdc188F6WEU2 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ccdc188F6WEU2 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Ccdc188F6WEU2 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC10.19□□□□□ -0.78
Ccdc188F6WEU2 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Ccdc188F6WEU2 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ccdc188F6WEU2 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ccdc188F6WEU2 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ccdc188F6WEU2 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ccdc188F6WEU2 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ccdc188F6WEU2 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Ccdc188F6WEU2 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC10.19□□□□□ -0.78
Ccdc188F6WEU2 Ttpal-207ENSMUST00000171696 4522 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ccdc188F6WEU2 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ccdc188F6WEU2 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Ccdc188F6WEU2 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC10.18□□□□□ -0.78
Ccdc188F6WEU2 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Ccdc188F6WEU2 Rgr-203ENSMUST00000225070 4704 ntBASIC10.18□□□□□ -0.78
Ccdc188F6WEU2 Tmem56-207ENSMUST00000155309 2230 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccdc188F6WEU2 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccdc188F6WEU2 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Ccdc188F6WEU2 Slc39a14-210ENSMUST00000152067 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccdc188F6WEU2 Gm42714-201ENSMUST00000202063 1364 ntBASIC10.18□□□□□ -0.78
Ccdc188F6WEU2 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Ccdc188F6WEU2 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccdc188F6WEU2 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccdc188F6WEU2 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccdc188F6WEU2 Ighv6-3-201ENSMUST00000103486 356 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Ccdc188F6WEU2 Ighv6-6-201ENSMUST00000103489 357 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Ccdc188F6WEU2 Gm24335-201ENSMUST00000104211 132 ntBASIC10.18□□□□□ -0.78
Ccdc188F6WEU2 Timp1-202ENSMUST00000115342 883 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccdc188F6WEU2 Gm13021-201ENSMUST00000135716 407 ntTSL 5 BASIC10.18□□□□□ -0.78
Ccdc188F6WEU2 A330043C09Rik-201ENSMUST00000139823 1009 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Ccdc188F6WEU2 Rps16-ps2-201ENSMUST00000140155 441 ntBASIC10.18□□□□□ -0.78
Ccdc188F6WEU2 Kcnd3os-202ENSMUST00000143893 718 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Ccdc188F6WEU2 Gm14061-201ENSMUST00000155923 1007 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Ccdc188F6WEU2 Fcor-201ENSMUST00000159364 392 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccdc188F6WEU2 Gm26739-201ENSMUST00000181041 427 ntTSL 3 BASIC10.18□□□□□ -0.78
Ccdc188F6WEU2 Gm38114-201ENSMUST00000191877 1232 ntBASIC10.18□□□□□ -0.78
Ccdc188F6WEU2 Gm22711-202ENSMUST00000197029 135 ntBASIC10.18□□□□□ -0.78
Ccdc188F6WEU2 Spata19-204ENSMUST00000214287 642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccdc188F6WEU2 AC160112.1-201ENSMUST00000219139 714 ntBASIC10.18□□□□□ -0.78
Ccdc188F6WEU2 AC140264.1-201ENSMUST00000220023 469 ntTSL 3 BASIC10.18□□□□□ -0.78
Ccdc188F6WEU2 AC156016.4-201ENSMUST00000227470 647 ntBASIC10.18□□□□□ -0.78
Ccdc188F6WEU2 AC102523.2-201ENSMUST00000227813 983 ntBASIC10.18□□□□□ -0.78
Ccdc188F6WEU2 Apoc2-201ENSMUST00000003074 631 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccdc188F6WEU2 Rasgrf1-201ENSMUST00000034909 853 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Ccdc188F6WEU2 Retnlg-201ENSMUST00000065666 608 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccdc188F6WEU2 Mir195a-201ENSMUST00000083477 94 ntBASIC10.18□□□□□ -0.78
Ccdc188F6WEU2 Snap47-201ENSMUST00000010038 1896 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccdc188F6WEU2 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
Ccdc188F6WEU2 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Ccdc188F6WEU2 Trp63-207ENSMUST00000115308 2380 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Ccdc188F6WEU2 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccdc188F6WEU2 4933402D24Rik-201ENSMUST00000027102 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccdc188F6WEU2 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC10.18□□□□□ -0.78
Ccdc188F6WEU2 Gm9466-201ENSMUST00000218144 2246 ntBASIC10.18□□□□□ -0.78
Ccdc188F6WEU2 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccdc188F6WEU2 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccdc188F6WEU2 C2-206ENSMUST00000152417 2157 ntTSL 5 BASIC10.18□□□□□ -0.78
Ccdc188F6WEU2 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Ccdc188F6WEU2 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC10.18□□□□□ -0.78
Ccdc188F6WEU2 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC10.18□□□□□ -0.78
Ccdc188F6WEU2 Gm19337-201ENSMUST00000218100 1584 ntBASIC10.18□□□□□ -0.78
Ccdc188F6WEU2 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Ccdc188F6WEU2 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Ccdc188F6WEU2 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms