Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm8055-201ENSMUST00000099956 1008 ntBASIC10.36□□□□□ -0.75
Trub1Q8C0D0 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Trub1Q8C0D0 Olfr222-202ENSMUST00000214351 2474 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Trub1Q8C0D0 3632454L22Rik-202ENSMUST00000153610 2872 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trub1Q8C0D0 Ccdc93-201ENSMUST00000036025 7274 ntAPPRIS P4 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trub1Q8C0D0 Fyco1-202ENSMUST00000167595 7692 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Trub1Q8C0D0 Gm15612-201ENSMUST00000147542 3118 ntTSL 2 BASIC10.36□□□□□ -0.75
Trub1Q8C0D0 Ces1f-201ENSMUST00000034178 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trub1Q8C0D0 AC238811.2-201ENSMUST00000224554 1509 ntBASIC10.36□□□□□ -0.75
Trub1Q8C0D0 Pcgf5-202ENSMUST00000071267 1508 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trub1Q8C0D0 Atp8b3-201ENSMUST00000020383 4412 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trub1Q8C0D0 Fubp1-220ENSMUST00000200524 2552 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trub1Q8C0D0 Mbnl1-203ENSMUST00000191747 4046 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trub1Q8C0D0 Elf2-213ENSMUST00000195432 2161 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trub1Q8C0D0 Atg2a-201ENSMUST00000045351 6371 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trub1Q8C0D0 Zfat-204ENSMUST00000162054 4386 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trub1Q8C0D0 CT033774.1-201ENSMUST00000223084 2394 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trub1Q8C0D0 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trub1Q8C0D0 Gm26911-201ENSMUST00000181770 1737 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trub1Q8C0D0 Olfr1491-204ENSMUST00000216366 1726 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Trub1Q8C0D0 Anxa7-207ENSMUST00000224975 2727 ntAPPRIS P2 BASIC10.35□□□□□ -0.75
Trub1Q8C0D0 Txlng-204ENSMUST00000112316 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trub1Q8C0D0 Csnk2a1-201ENSMUST00000099224 4206 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trub1Q8C0D0 Tmem156-201ENSMUST00000043352 1565 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Trub1Q8C0D0 Gm43633-201ENSMUST00000202455 2330 ntBASIC10.35□□□□□ -0.75
Trub1Q8C0D0 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC10.35□□□□□ -0.75
Trub1Q8C0D0 Myh9-201ENSMUST00000016771 7433 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trub1Q8C0D0 Arel1-201ENSMUST00000043169 5446 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trub1Q8C0D0 Gm45895-201ENSMUST00000212248 1697 ntTSL 5 BASIC10.35□□□□□ -0.75
Trub1Q8C0D0 Lsm6-203ENSMUST00000130325 3792 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trub1Q8C0D0 Srgap2-204ENSMUST00000186543 3533 ntTSL 5 BASIC10.35□□□□□ -0.75
Trub1Q8C0D0 Kirrel3-205ENSMUST00000187182 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trub1Q8C0D0 Ywhag-201ENSMUST00000055808 3520 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trub1Q8C0D0 2810032G03Rik-202ENSMUST00000163627 2514 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trub1Q8C0D0 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trub1Q8C0D0 Lyrm1-202ENSMUST00000106516 1069 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trub1Q8C0D0 Gm8606-201ENSMUST00000121482 888 ntBASIC10.35□□□□□ -0.75
Trub1Q8C0D0 Taz-213ENSMUST00000135504 747 ntTSL 5 BASIC10.35□□□□□ -0.75
Trub1Q8C0D0 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC10.35□□□□□ -0.75
Trub1Q8C0D0 Mir1941-201ENSMUST00000157834 83 ntBASIC10.35□□□□□ -0.75
Trub1Q8C0D0 Gm8379-201ENSMUST00000165448 1192 ntBASIC10.35□□□□□ -0.75
Trub1Q8C0D0 Tnxa-201ENSMUST00000173277 2975 ntBASIC10.35□□□□□ -0.75
Trub1Q8C0D0 Cd9-ps-201ENSMUST00000174687 650 ntBASIC10.35□□□□□ -0.75
Trub1Q8C0D0 Gm2907-201ENSMUST00000181256 1192 ntBASIC10.35□□□□□ -0.75
Trub1Q8C0D0 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trub1Q8C0D0 Gm8525-201ENSMUST00000189674 861 ntBASIC10.35□□□□□ -0.75
Trub1Q8C0D0 Gm8643-201ENSMUST00000195228 625 ntBASIC10.35□□□□□ -0.75
Trub1Q8C0D0 Gm44131-201ENSMUST00000203036 394 ntBASIC10.35□□□□□ -0.75
Trub1Q8C0D0 Nosip-207ENSMUST00000210520 534 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Trub1Q8C0D0 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trub1Q8C0D0 AC153363.1-201ENSMUST00000213572 359 ntBASIC10.35□□□□□ -0.75
Trub1Q8C0D0 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trub1Q8C0D0 Gm7242-201ENSMUST00000221134 705 ntBASIC10.35□□□□□ -0.75
Trub1Q8C0D0 AC169511.1-201ENSMUST00000227639 995 ntBASIC10.35□□□□□ -0.75
Trub1Q8C0D0 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trub1Q8C0D0 Olfr1115-201ENSMUST00000081986 1102 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Trub1Q8C0D0 Krtap3-2-201ENSMUST00000092699 1031 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Trub1Q8C0D0 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Trub1Q8C0D0 Clip1-203ENSMUST00000111561 5883 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Trub1Q8C0D0 Agpat3-204ENSMUST00000105389 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trub1Q8C0D0 Gm11426-201ENSMUST00000125600 2220 ntTSL 2 BASIC10.35□□□□□ -0.75
Trub1Q8C0D0 Gm37003-201ENSMUST00000194702 2827 ntBASIC10.35□□□□□ -0.75
Trub1Q8C0D0 Adamts4-201ENSMUST00000111314 3761 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trub1Q8C0D0 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC10.35□□□□□ -0.75
Trub1Q8C0D0 Ctns-201ENSMUST00000006103 2570 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trub1Q8C0D0 Disp2-203ENSMUST00000110843 2949 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trub1Q8C0D0 Ccdc136-202ENSMUST00000115275 3279 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Trub1Q8C0D0 Pik3c3-203ENSMUST00000115812 3257 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trub1Q8C0D0 Hspa12a-201ENSMUST00000066285 5733 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trub1Q8C0D0 Atp5s-201ENSMUST00000021372 1485 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trub1Q8C0D0 Slc25a14-204ENSMUST00000134257 1805 ntAPPRIS ALT1 TSL 5 BASIC10.35□□□□□ -0.75
Trub1Q8C0D0 Gm7932-202ENSMUST00000205047 2194 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trub1Q8C0D0 Morc2a-201ENSMUST00000093389 5085 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trub1Q8C0D0 Kirrel3-201ENSMUST00000045091 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trub1Q8C0D0 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trub1Q8C0D0 Gm10417-201ENSMUST00000194341 3522 ntBASIC10.34□□□□□ -0.75
Trub1Q8C0D0 Adat1-201ENSMUST00000034427 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trub1Q8C0D0 Slc38a3-203ENSMUST00000177567 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trub1Q8C0D0 Cacna1f-201ENSMUST00000115725 6028 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Trub1Q8C0D0 Sall4-203ENSMUST00000103074 3741 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trub1Q8C0D0 Pcdh15-207ENSMUST00000124046 5336 ntTSL 5 BASIC10.34□□□□□ -0.75
Trub1Q8C0D0 Galns-201ENSMUST00000015171 2557 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trub1Q8C0D0 Ubash3b-206ENSMUST00000151485 2231 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trub1Q8C0D0 4930570G19Rik-201ENSMUST00000139363 3112 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trub1Q8C0D0 Adamts4-203ENSMUST00000219033 4386 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trub1Q8C0D0 Gdpd1-201ENSMUST00000020804 2336 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trub1Q8C0D0 Gm11100-201ENSMUST00000112652 1951 ntTSL 5 BASIC10.34□□□□□ -0.75
Trub1Q8C0D0 Lpin1-201ENSMUST00000067124 5581 ntAPPRIS P4 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trub1Q8C0D0 Zmpste24-201ENSMUST00000058754 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trub1Q8C0D0 Gm4926-201ENSMUST00000132691 1610 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trub1Q8C0D0 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trub1Q8C0D0 Gm22495-201ENSMUST00000104492 126 ntBASIC10.34□□□□□ -0.75
Trub1Q8C0D0 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trub1Q8C0D0 Smgc-204ENSMUST00000109277 855 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trub1Q8C0D0 Wfdc2-203ENSMUST00000109345 558 ntAPPRIS ALT2 TSL 3 BASIC10.34□□□□□ -0.75
Trub1Q8C0D0 Gm11518-201ENSMUST00000118048 411 ntBASIC10.34□□□□□ -0.75
Trub1Q8C0D0 Gm11929-201ENSMUST00000118175 945 ntBASIC10.34□□□□□ -0.75
Trub1Q8C0D0 Gm8019-201ENSMUST00000119317 587 ntBASIC10.34□□□□□ -0.75
Trub1Q8C0D0 Gm28309-201ENSMUST00000136302 623 ntTSL 5 BASIC10.34□□□□□ -0.75
Trub1Q8C0D0 2410152P15Rik-201ENSMUST00000137405 871 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms