Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Stmn3-201ENSMUST00000103045 1136 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Clrn1Q8K445 Bcl2l11-204ENSMUST00000103211 672 ntAPPRIS ALT2 TSL 2 BASIC9.52□□□□□ -0.89
Clrn1Q8K445 Gm22594-201ENSMUST00000104251 130 ntBASIC9.52□□□□□ -0.89
Clrn1Q8K445 Gm25561-201ENSMUST00000104607 125 ntBASIC9.52□□□□□ -0.89
Clrn1Q8K445 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Clrn1Q8K445 Itgad-202ENSMUST00000106237 4105 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Clrn1Q8K445 Slc25a21-202ENSMUST00000110680 918 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Clrn1Q8K445 Rplp1-ps1-201ENSMUST00000119410 345 ntBASIC9.52□□□□□ -0.89
Clrn1Q8K445 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC9.52□□□□□ -0.89
Clrn1Q8K445 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Clrn1Q8K445 2010204K13Rik-203ENSMUST00000150671 885 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Clrn1Q8K445 Gm22885-201ENSMUST00000157410 107 ntBASIC9.52□□□□□ -0.89
Clrn1Q8K445 Tstd1-201ENSMUST00000171362 551 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
Clrn1Q8K445 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC9.52□□□□□ -0.89
Clrn1Q8K445 Gm6967-201ENSMUST00000182599 1007 ntBASIC9.52□□□□□ -0.89
Clrn1Q8K445 Gm27203-201ENSMUST00000183677 307 ntBASIC9.52□□□□□ -0.89
Clrn1Q8K445 Gm27200-201ENSMUST00000184626 657 ntTSL 3 BASIC9.52□□□□□ -0.89
Clrn1Q8K445 1700019D03Rik-206ENSMUST00000190831 653 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
Clrn1Q8K445 1700012J22Rik-201ENSMUST00000193492 830 ntBASIC9.52□□□□□ -0.89
Clrn1Q8K445 Gm37782-201ENSMUST00000194879 678 ntBASIC9.52□□□□□ -0.89
Clrn1Q8K445 Gm42433-201ENSMUST00000196806 940 ntBASIC9.52□□□□□ -0.89
Clrn1Q8K445 Zfp775-203ENSMUST00000204095 4143 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
Clrn1Q8K445 Gm6342-201ENSMUST00000204344 766 ntBASIC9.52□□□□□ -0.89
Clrn1Q8K445 Gm32786-201ENSMUST00000211351 628 ntTSL 3 BASIC9.52□□□□□ -0.89
Clrn1Q8K445 Gm7242-201ENSMUST00000221134 705 ntBASIC9.52□□□□□ -0.89
Clrn1Q8K445 AC116797.2-202ENSMUST00000223587 1017 ntBASIC9.52□□□□□ -0.89
Clrn1Q8K445 AC242269.1-201ENSMUST00000227020 741 ntBASIC9.52□□□□□ -0.89
Clrn1Q8K445 Eif3m-201ENSMUST00000028592 1283 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Clrn1Q8K445 Nadsyn1-201ENSMUST00000033415 2641 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Clrn1Q8K445 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Clrn1Q8K445 Olfr47-201ENSMUST00000078057 1059 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Clrn1Q8K445 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Clrn1Q8K445 Olfr1229-201ENSMUST00000099788 1019 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Clrn1Q8K445 Gm42879-201ENSMUST00000198656 2214 ntBASIC9.52□□□□□ -0.89
Clrn1Q8K445 Gpatch4-201ENSMUST00000029707 1630 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Clrn1Q8K445 Slc1a2-202ENSMUST00000080210 11595 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Clrn1Q8K445 Sgk3-204ENSMUST00000171265 3680 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Clrn1Q8K445 Spag6l-201ENSMUST00000023468 2416 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Clrn1Q8K445 Dclk1-203ENSMUST00000167204 6025 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Clrn1Q8K445 Olfr1219-204ENSMUST00000215225 5865 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Clrn1Q8K445 Cpne5-201ENSMUST00000024805 4344 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Clrn1Q8K445 Pibf1-201ENSMUST00000022650 2797 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Clrn1Q8K445 Gm44926-201ENSMUST00000207898 1826 ntBASIC9.52□□□□□ -0.89
Clrn1Q8K445 Kcnj15-206ENSMUST00000113859 5046 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Clrn1Q8K445 Rpl18-207ENSMUST00000210640 2989 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Clrn1Q8K445 Lrpap1-201ENSMUST00000030986 2981 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Clrn1Q8K445 Epha6-203ENSMUST00000161358 1356 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Clrn1Q8K445 Plec-217ENSMUST00000169438 14827 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Clrn1Q8K445 Wdr20rt-202ENSMUST00000221658 1570 ntTSL 5 BASIC9.51□□□□□ -0.89
Clrn1Q8K445 Bpifb9a-201ENSMUST00000088924 2065 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Clrn1Q8K445 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Clrn1Q8K445 Chd2-203ENSMUST00000169922 9085 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Clrn1Q8K445 Ptbp3-202ENSMUST00000102883 3409 ntAPPRIS P4 TSL 1 (best) BASIC9.51□□□□□ -0.89
Clrn1Q8K445 CT010575.1-201ENSMUST00000220666 2924 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Clrn1Q8K445 Gm45153-201ENSMUST00000205957 1901 ntBASIC9.51□□□□□ -0.89
Clrn1Q8K445 Arg2-201ENSMUST00000021550 1428 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Clrn1Q8K445 Mfsd11-201ENSMUST00000021173 3298 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Clrn1Q8K445 Cd200r2-201ENSMUST00000102805 1750 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Clrn1Q8K445 Rpl10a-ps1-201ENSMUST00000120360 654 ntBASIC9.51□□□□□ -0.89
Clrn1Q8K445 Gm13393-201ENSMUST00000141935 396 ntTSL 5 BASIC9.51□□□□□ -0.89
Clrn1Q8K445 Gm12962-202ENSMUST00000144212 691 ntTSL 2 BASIC9.51□□□□□ -0.89
Clrn1Q8K445 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC9.51□□□□□ -0.89
Clrn1Q8K445 Gm21958-201ENSMUST00000178832 648 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
Clrn1Q8K445 Gm28975-201ENSMUST00000186412 686 ntBASIC9.51□□□□□ -0.89
Clrn1Q8K445 Gm37688-201ENSMUST00000195195 465 ntBASIC9.51□□□□□ -0.89
Clrn1Q8K445 Gm37963-201ENSMUST00000195351 613 ntTSL 3 BASIC9.51□□□□□ -0.89
Clrn1Q8K445 Gm37016-201ENSMUST00000195507 660 ntTSL 5 BASIC9.51□□□□□ -0.89
Clrn1Q8K445 Rhoc-205ENSMUST00000196817 877 ntAPPRIS P1 TSL 3 BASIC9.51□□□□□ -0.89
Clrn1Q8K445 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC9.51□□□□□ -0.89
Clrn1Q8K445 AC160991.1-201ENSMUST00000224924 753 ntBASIC9.51□□□□□ -0.89
Clrn1Q8K445 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Clrn1Q8K445 Haao-201ENSMUST00000000687 1222 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Clrn1Q8K445 Slc5a9-201ENSMUST00000102719 2460 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Clrn1Q8K445 Gm42432-201ENSMUST00000197902 1617 ntBASIC9.51□□□□□ -0.89
Clrn1Q8K445 Xlr3a-201ENSMUST00000074619 1645 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Clrn1Q8K445 Zbtb34-202ENSMUST00000113158 6602 ntAPPRIS P1 TSL 3 BASIC9.51□□□□□ -0.89
Clrn1Q8K445 Map4-204ENSMUST00000164930 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Clrn1Q8K445 Kif3a-202ENSMUST00000118353 2178 ntTSL 5 BASIC9.51□□□□□ -0.89
Clrn1Q8K445 Ube2f-203ENSMUST00000171165 5654 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Clrn1Q8K445 Mlph-201ENSMUST00000027528 4499 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Clrn1Q8K445 Htr5a-201ENSMUST00000036227 5376 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Clrn1Q8K445 Mfn2-201ENSMUST00000030884 4341 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Clrn1Q8K445 Fbxo32-201ENSMUST00000022986 6976 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Clrn1Q8K445 Kcnmb1-201ENSMUST00000020362 4191 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Clrn1Q8K445 Pde11a-201ENSMUST00000099992 4189 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Clrn1Q8K445 Oas3-201ENSMUST00000044833 4720 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Clrn1Q8K445 1700010I14Rik-203ENSMUST00000151609 1853 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Clrn1Q8K445 Cpsf3-211ENSMUST00000222968 1858 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Clrn1Q8K445 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Clrn1Q8K445 Gm15894-201ENSMUST00000162828 2067 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Clrn1Q8K445 H2-M10.1-201ENSMUST00000025322 1394 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Clrn1Q8K445 Nrp1-201ENSMUST00000026917 3597 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Clrn1Q8K445 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC9.5□□□□□ -0.89
Clrn1Q8K445 Nectin4-203ENSMUST00000111286 3201 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Clrn1Q8K445 Bco1-201ENSMUST00000034308 2338 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
Clrn1Q8K445 Rrh-202ENSMUST00000171313 1759 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Clrn1Q8K445 D3Ertd751e-201ENSMUST00000026867 1989 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Clrn1Q8K445 Lrrc61-202ENSMUST00000114545 2913 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Clrn1Q8K445 Zfp131-203ENSMUST00000223722 3109 ntAPPRIS ALT2 BASIC9.5□□□□□ -0.89
Clrn1Q8K445 Reep1-203ENSMUST00000212792 3339 ntTSL 5 BASIC9.5□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 77.4 ms