Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Sdcbp-202ENSMUST00000103008 2086 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ccdc188F6WEU2 AC154404.1-201ENSMUST00000223601 2077 ntBASIC10.24□□□□□ -0.77
Ccdc188F6WEU2 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ccdc188F6WEU2 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Ccdc188F6WEU2 Scnn1a-207ENSMUST00000177329 2807 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Ccdc188F6WEU2 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Ccdc188F6WEU2 Tmem29-212ENSMUST00000173996 1433 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
Ccdc188F6WEU2 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ccdc188F6WEU2 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ccdc188F6WEU2 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ccdc188F6WEU2 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccdc188F6WEU2 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccdc188F6WEU2 Gtf2f2-201ENSMUST00000088922 1467 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccdc188F6WEU2 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccdc188F6WEU2 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccdc188F6WEU2 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC10.23□□□□□ -0.77
Ccdc188F6WEU2 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccdc188F6WEU2 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccdc188F6WEU2 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccdc188F6WEU2 Uspl1-202ENSMUST00000100410 3148 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Ccdc188F6WEU2 Clcn1-201ENSMUST00000031894 3545 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccdc188F6WEU2 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccdc188F6WEU2 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccdc188F6WEU2 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccdc188F6WEU2 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC10.23□□□□□ -0.77
Ccdc188F6WEU2 Ephx1-202ENSMUST00000111068 1699 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Ccdc188F6WEU2 Gm45440-201ENSMUST00000209826 1655 ntBASIC10.23□□□□□ -0.77
Ccdc188F6WEU2 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Ccdc188F6WEU2 Rpl22-201ENSMUST00000103191 474 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccdc188F6WEU2 Gm24786-201ENSMUST00000157379 109 ntBASIC10.23□□□□□ -0.77
Ccdc188F6WEU2 Gm16556-201ENSMUST00000162608 471 ntTSL 5 BASIC10.23□□□□□ -0.77
Ccdc188F6WEU2 Gm933-201ENSMUST00000179384 679 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
Ccdc188F6WEU2 Gm18822-201ENSMUST00000182857 1025 ntBASIC10.23□□□□□ -0.77
Ccdc188F6WEU2 Gm20587-201ENSMUST00000186367 1186 ntBASIC10.23□□□□□ -0.77
Ccdc188F6WEU2 Gm38134-201ENSMUST00000191858 1234 ntTSL 5 BASIC10.23□□□□□ -0.77
Ccdc188F6WEU2 Gm42780-201ENSMUST00000197083 734 ntBASIC10.23□□□□□ -0.77
Ccdc188F6WEU2 Gm42495-201ENSMUST00000200324 405 ntTSL 3 BASIC10.23□□□□□ -0.77
Ccdc188F6WEU2 Fcer2a-207ENSMUST00000208492 1053 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccdc188F6WEU2 AC153864.1-201ENSMUST00000218482 523 ntBASIC10.23□□□□□ -0.77
Ccdc188F6WEU2 AC152946.3-201ENSMUST00000219424 280 ntBASIC10.23□□□□□ -0.77
Ccdc188F6WEU2 Gm9973-204ENSMUST00000221569 683 ntTSL 5 BASIC10.23□□□□□ -0.77
Ccdc188F6WEU2 Gm9973-205ENSMUST00000223449 849 ntTSL 5 BASIC10.23□□□□□ -0.77
Ccdc188F6WEU2 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC10.23□□□□□ -0.77
Ccdc188F6WEU2 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccdc188F6WEU2 A530006G24Rik-201ENSMUST00000152542 1331 ntTSL 2 BASIC10.23□□□□□ -0.77
Ccdc188F6WEU2 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccdc188F6WEU2 Calr3-202ENSMUST00000109974 1371 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Ccdc188F6WEU2 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Ccdc188F6WEU2 Pla2g4c-ps-201ENSMUST00000204668 1364 ntBASIC10.23□□□□□ -0.77
Ccdc188F6WEU2 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Ccdc188F6WEU2 Bzw2-201ENSMUST00000020856 1871 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccdc188F6WEU2 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccdc188F6WEU2 Acvr1-203ENSMUST00000112599 2891 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccdc188F6WEU2 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccdc188F6WEU2 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Ccdc188F6WEU2 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC10.23□□□□□ -0.77
Ccdc188F6WEU2 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC10.23□□□□□ -0.77
Ccdc188F6WEU2 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccdc188F6WEU2 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Ccdc188F6WEU2 Foxm1-201ENSMUST00000073316 4652 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ccdc188F6WEU2 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ccdc188F6WEU2 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ccdc188F6WEU2 Gm16559-201ENSMUST00000160080 1564 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Ccdc188F6WEU2 P2rx2-206ENSMUST00000200214 1568 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Ccdc188F6WEU2 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC10.22□□□□□ -0.77
Ccdc188F6WEU2 Gm33940-201ENSMUST00000209205 1601 ntTSL 5 BASIC10.22□□□□□ -0.77
Ccdc188F6WEU2 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ccdc188F6WEU2 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Ccdc188F6WEU2 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Ccdc188F6WEU2 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ccdc188F6WEU2 Cst6-201ENSMUST00000025764 3951 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ccdc188F6WEU2 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ccdc188F6WEU2 Btc-201ENSMUST00000121044 2876 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ccdc188F6WEU2 AC160550.2-202ENSMUST00000227812 1861 ntBASIC10.22□□□□□ -0.77
Ccdc188F6WEU2 Gm12168-201ENSMUST00000119051 368 ntBASIC10.22□□□□□ -0.77
Ccdc188F6WEU2 Gm9051-201ENSMUST00000119335 1035 ntBASIC10.22□□□□□ -0.77
Ccdc188F6WEU2 Gm13675-201ENSMUST00000120616 529 ntBASIC10.22□□□□□ -0.77
Ccdc188F6WEU2 Gm14830-201ENSMUST00000121899 700 ntBASIC10.22□□□□□ -0.77
Ccdc188F6WEU2 Snhg12-201ENSMUST00000126380 890 ntTSL 2 BASIC10.22□□□□□ -0.77
Ccdc188F6WEU2 Gm15418-201ENSMUST00000151014 677 ntTSL 5 BASIC10.22□□□□□ -0.77
Ccdc188F6WEU2 Gm2541-201ENSMUST00000161209 711 ntBASIC10.22□□□□□ -0.77
Ccdc188F6WEU2 Gm16585-201ENSMUST00000161442 610 ntBASIC10.22□□□□□ -0.77
Ccdc188F6WEU2 Pitpnm2os2-202ENSMUST00000162577 744 ntTSL 3 BASIC10.22□□□□□ -0.77
Ccdc188F6WEU2 Gm9844-201ENSMUST00000170837 485 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Ccdc188F6WEU2 Cd209b-203ENSMUST00000171635 1000 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ccdc188F6WEU2 Gm25193-201ENSMUST00000176615 97 ntBASIC10.22□□□□□ -0.77
Ccdc188F6WEU2 Gm7083-201ENSMUST00000178617 450 ntBASIC10.22□□□□□ -0.77
Ccdc188F6WEU2 Msmb-201ENSMUST00000022464 562 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ccdc188F6WEU2 n-R5s74-201ENSMUST00000082654 116 ntBASIC10.22□□□□□ -0.77
Ccdc188F6WEU2 Gm23973-201ENSMUST00000083320 321 ntBASIC10.22□□□□□ -0.77
Ccdc188F6WEU2 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Ccdc188F6WEU2 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Ccdc188F6WEU2 9230102K24Rik-201ENSMUST00000219459 1303 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Ccdc188F6WEU2 Plbd1-201ENSMUST00000032336 2010 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ccdc188F6WEU2 Gm45675-201ENSMUST00000211202 3429 ntBASIC10.22□□□□□ -0.77
Ccdc188F6WEU2 Gm46995-201ENSMUST00000223445 1378 ntBASIC10.22□□□□□ -0.77
Ccdc188F6WEU2 Nmt1-201ENSMUST00000021314 4861 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ccdc188F6WEU2 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC10.22□□□□□ -0.77
Ccdc188F6WEU2 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ccdc188F6WEU2 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 88.4 ms