Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Sec61a2Q9JLR1 1700001J04Rik-202ENSMUST00000154037 743 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Sec61a2Q9JLR1 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC9.14□□□□□ -0.95
Sec61a2Q9JLR1 Igkv4-54-201ENSMUST00000177697 288 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Sec61a2Q9JLR1 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Sec61a2Q9JLR1 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC9.14□□□□□ -0.95
Sec61a2Q9JLR1 Gm28415-201ENSMUST00000187528 452 ntTSL 2 BASIC9.14□□□□□ -0.95
Sec61a2Q9JLR1 Gm29157-201ENSMUST00000188753 612 ntBASIC9.14□□□□□ -0.95
Sec61a2Q9JLR1 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Sec61a2Q9JLR1 Gm37232-201ENSMUST00000194887 367 ntBASIC9.14□□□□□ -0.95
Sec61a2Q9JLR1 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
Sec61a2Q9JLR1 Pcdh7-207ENSMUST00000199310 659 ntTSL 2 BASIC9.14□□□□□ -0.95
Sec61a2Q9JLR1 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Sec61a2Q9JLR1 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Sec61a2Q9JLR1 Gm45574-201ENSMUST00000210921 331 ntBASIC9.14□□□□□ -0.95
Sec61a2Q9JLR1 Gpx4-ps2-201ENSMUST00000214811 555 ntBASIC9.14□□□□□ -0.95
Sec61a2Q9JLR1 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC9.14□□□□□ -0.95
Sec61a2Q9JLR1 AC164556.1-201ENSMUST00000221318 751 ntBASIC9.14□□□□□ -0.95
Sec61a2Q9JLR1 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Sec61a2Q9JLR1 AC154634.3-201ENSMUST00000224589 736 ntBASIC9.14□□□□□ -0.95
Sec61a2Q9JLR1 AC137871.1-201ENSMUST00000228278 475 ntBASIC9.14□□□□□ -0.95
Sec61a2Q9JLR1 Stpg4-201ENSMUST00000040609 847 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Sec61a2Q9JLR1 Olfr1219-201ENSMUST00000099797 936 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Sec61a2Q9JLR1 Tpm3-204ENSMUST00000119570 2233 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Sec61a2Q9JLR1 AC122293.1-201ENSMUST00000218333 2231 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Sec61a2Q9JLR1 Tmem30c-203ENSMUST00000120112 3478 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Sec61a2Q9JLR1 Arhgap6-205ENSMUST00000112131 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Sec61a2Q9JLR1 Phc1-203ENSMUST00000112600 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Sec61a2Q9JLR1 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Sec61a2Q9JLR1 Stx16-201ENSMUST00000044638 3731 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Sec61a2Q9JLR1 Zfp7-201ENSMUST00000023179 2769 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Sec61a2Q9JLR1 Slco4c1-201ENSMUST00000071985 4908 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Sec61a2Q9JLR1 Svep1-201ENSMUST00000042850 11629 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Sec61a2Q9JLR1 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Sec61a2Q9JLR1 Smok3a-202ENSMUST00000171498 2327 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Sec61a2Q9JLR1 N6amt1-204ENSMUST00000120284 3473 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Sec61a2Q9JLR1 Gpatch8-206ENSMUST00000143842 6871 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Sec61a2Q9JLR1 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Sec61a2Q9JLR1 Car13-201ENSMUST00000029071 2299 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Sec61a2Q9JLR1 Apobr-201ENSMUST00000039522 3685 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Sec61a2Q9JLR1 Gm37484-201ENSMUST00000195378 2523 ntBASIC9.13□□□□□ -0.95
Sec61a2Q9JLR1 Cacna1c-204ENSMUST00000112793 6669 ntAPPRIS P4 TSL 1 (best) BASIC9.13□□□□□ -0.95
Sec61a2Q9JLR1 Fndc1-202ENSMUST00000097425 5845 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Sec61a2Q9JLR1 Mre11a-201ENSMUST00000034405 3286 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Sec61a2Q9JLR1 Cfb-201ENSMUST00000025229 2737 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Sec61a2Q9JLR1 Calr4-204ENSMUST00000106631 2155 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Sec61a2Q9JLR1 Shcbp1-201ENSMUST00000022945 2156 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Sec61a2Q9JLR1 Rd3-202ENSMUST00000180463 3724 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Sec61a2Q9JLR1 Pkd1l3-203ENSMUST00000212537 6576 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Sec61a2Q9JLR1 Enox2-202ENSMUST00000114911 2623 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Sec61a2Q9JLR1 AC160060.1-201ENSMUST00000217840 1813 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Sec61a2Q9JLR1 5330439K02Rik-201ENSMUST00000180953 2312 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Sec61a2Q9JLR1 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC9.13□□□□□ -0.95
Sec61a2Q9JLR1 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Sec61a2Q9JLR1 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
Sec61a2Q9JLR1 Tpm1-205ENSMUST00000113685 1208 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Sec61a2Q9JLR1 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Sec61a2Q9JLR1 Gm15032-201ENSMUST00000118547 411 ntBASIC9.13□□□□□ -0.95
Sec61a2Q9JLR1 Gm4993-201ENSMUST00000118719 1174 ntBASIC9.13□□□□□ -0.95
Sec61a2Q9JLR1 Olfr1372-ps1-201ENSMUST00000121007 934 ntBASIC9.13□□□□□ -0.95
Sec61a2Q9JLR1 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC9.13□□□□□ -0.95
Sec61a2Q9JLR1 Gm16322-202ENSMUST00000141275 700 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Sec61a2Q9JLR1 Gm12927-201ENSMUST00000150252 373 ntTSL 2 BASIC9.13□□□□□ -0.95
Sec61a2Q9JLR1 Gm5526-201ENSMUST00000153604 423 ntBASIC9.13□□□□□ -0.95
Sec61a2Q9JLR1 Gm9507-202ENSMUST00000180157 654 ntBASIC9.13□□□□□ -0.95
Sec61a2Q9JLR1 Gm26550-201ENSMUST00000180699 1184 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Sec61a2Q9JLR1 Gm42433-201ENSMUST00000196806 940 ntBASIC9.13□□□□□ -0.95
Sec61a2Q9JLR1 Gm42493-201ENSMUST00000197559 1121 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Sec61a2Q9JLR1 Gm2448-201ENSMUST00000207080 559 ntBASIC9.13□□□□□ -0.95
Sec61a2Q9JLR1 Gm18204-201ENSMUST00000209835 793 ntBASIC9.13□□□□□ -0.95
Sec61a2Q9JLR1 AC113291.2-201ENSMUST00000215490 1205 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Sec61a2Q9JLR1 AC154585.1-201ENSMUST00000218917 997 ntBASIC9.13□□□□□ -0.95
Sec61a2Q9JLR1 Gm35638-201ENSMUST00000220724 652 ntBASIC9.13□□□□□ -0.95
Sec61a2Q9JLR1 Gm6353-201ENSMUST00000223234 1051 ntBASIC9.13□□□□□ -0.95
Sec61a2Q9JLR1 AC134860.2-201ENSMUST00000225277 1036 ntBASIC9.13□□□□□ -0.95
Sec61a2Q9JLR1 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Sec61a2Q9JLR1 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Sec61a2Q9JLR1 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Sec61a2Q9JLR1 Gm43817-201ENSMUST00000196459 2262 ntBASIC9.13□□□□□ -0.95
Sec61a2Q9JLR1 Gm38169-201ENSMUST00000191822 2539 ntBASIC9.13□□□□□ -0.95
Sec61a2Q9JLR1 Acp1-202ENSMUST00000074038 2754 ntAPPRIS ALT1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Sec61a2Q9JLR1 AI606181-201ENSMUST00000099454 2796 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Sec61a2Q9JLR1 Rnf111-207ENSMUST00000215848 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Sec61a2Q9JLR1 Tia1-202ENSMUST00000095753 4477 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Sec61a2Q9JLR1 Anxa6-202ENSMUST00000108883 2489 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Sec61a2Q9JLR1 Scmh1-203ENSMUST00000106298 1995 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Sec61a2Q9JLR1 Sdhc-202ENSMUST00000111336 3171 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Sec61a2Q9JLR1 Plscr2-205ENSMUST00000180154 1900 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Sec61a2Q9JLR1 Mov10-203ENSMUST00000106775 3584 ntTSL 5 BASIC9.13□□□□□ -0.95
Sec61a2Q9JLR1 Mov10-206ENSMUST00000166979 3584 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Sec61a2Q9JLR1 Il18bp-202ENSMUST00000209368 2596 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Sec61a2Q9JLR1 Zfp512-201ENSMUST00000076264 3299 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Sec61a2Q9JLR1 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Sec61a2Q9JLR1 Adra1a-205ENSMUST00000161339 2788 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Sec61a2Q9JLR1 Galnt16-201ENSMUST00000021558 3922 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Sec61a2Q9JLR1 Gm9220-201ENSMUST00000190721 2544 ntBASIC9.12□□□□□ -0.95
Sec61a2Q9JLR1 R3hcc1l-201ENSMUST00000026188 4112 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Sec61a2Q9JLR1 Serpinb8-202ENSMUST00000112706 4581 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Sec61a2Q9JLR1 Adcy4-201ENSMUST00000002398 3444 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Sec61a2Q9JLR1 Cfap100-201ENSMUST00000062750 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms