Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Slc35f6-201ENSMUST00000062962 3088 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Clrn1Q8K445 Sh3gl2-202ENSMUST00000107184 671 ntTSL 2 BASIC9.54□□□□□ -0.88
Clrn1Q8K445 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Clrn1Q8K445 Gm14853-201ENSMUST00000116081 549 ntBASIC9.54□□□□□ -0.88
Clrn1Q8K445 Gm6517-201ENSMUST00000121056 511 ntBASIC9.54□□□□□ -0.88
Clrn1Q8K445 Gm13827-201ENSMUST00000148801 372 ntBASIC9.54□□□□□ -0.88
Clrn1Q8K445 Gm4862-201ENSMUST00000170405 438 ntBASIC9.54□□□□□ -0.88
Clrn1Q8K445 Gm20493-201ENSMUST00000173706 213 ntBASIC9.54□□□□□ -0.88
Clrn1Q8K445 Gal3st2b-201ENSMUST00000177958 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Clrn1Q8K445 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC9.54□□□□□ -0.88
Clrn1Q8K445 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Clrn1Q8K445 Gm19798-201ENSMUST00000201502 457 ntBASIC9.54□□□□□ -0.88
Clrn1Q8K445 Ghrl-203ENSMUST00000203588 237 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Clrn1Q8K445 AC166165.1-201ENSMUST00000214352 874 ntTSL 5 BASIC9.54□□□□□ -0.88
Clrn1Q8K445 Gm7594-201ENSMUST00000218595 871 ntBASIC9.54□□□□□ -0.88
Clrn1Q8K445 AC156790.2-201ENSMUST00000227115 568 ntBASIC9.54□□□□□ -0.88
Clrn1Q8K445 AC121567.1-201ENSMUST00000227213 842 ntBASIC9.54□□□□□ -0.88
Clrn1Q8K445 AC164099.1-201ENSMUST00000227780 333 ntBASIC9.54□□□□□ -0.88
Clrn1Q8K445 CT010505.2-201ENSMUST00000227918 998 ntBASIC9.54□□□□□ -0.88
Clrn1Q8K445 Cypt12-201ENSMUST00000029080 550 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Clrn1Q8K445 Gimap7-201ENSMUST00000052503 1269 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Clrn1Q8K445 Eno2-202ENSMUST00000112476 2386 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Clrn1Q8K445 Xdh-201ENSMUST00000024866 4587 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Clrn1Q8K445 Med12l-206ENSMUST00000199659 11006 ntAPPRIS P2 TSL 5 BASIC9.54□□□□□ -0.88
Clrn1Q8K445 Gm6713-201ENSMUST00000216137 1446 ntBASIC9.54□□□□□ -0.88
Clrn1Q8K445 Lrrk2-201ENSMUST00000060642 8275 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Clrn1Q8K445 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Clrn1Q8K445 Gm30132-201ENSMUST00000212816 8757 ntTSL 5 BASIC9.54□□□□□ -0.88
Clrn1Q8K445 Igf2bp2-202ENSMUST00000115379 3078 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Clrn1Q8K445 Cyp2e1-201ENSMUST00000026552 1833 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Clrn1Q8K445 Igsf11-202ENSMUST00000114706 1578 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Clrn1Q8K445 Tmbim7-201ENSMUST00000014673 1552 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Clrn1Q8K445 Zfp275-201ENSMUST00000033731 6376 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Clrn1Q8K445 Tnfrsf9-204ENSMUST00000105672 1999 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Clrn1Q8K445 Hormad2-202ENSMUST00000109948 1969 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Clrn1Q8K445 Gm20735-201ENSMUST00000212077 1979 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Clrn1Q8K445 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC9.54□□□□□ -0.88
Clrn1Q8K445 Homer1-204ENSMUST00000102752 5713 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Clrn1Q8K445 Hivep3-209ENSMUST00000166542 7253 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Clrn1Q8K445 Casz1-201ENSMUST00000094464 4349 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Clrn1Q8K445 Acer2-202ENSMUST00000084433 4060 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Clrn1Q8K445 CT868720.1-201ENSMUST00000223069 2544 ntBASIC9.53□□□□□ -0.88
Clrn1Q8K445 Dusp16-201ENSMUST00000100857 5104 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Clrn1Q8K445 Mkrn1-ps1-201ENSMUST00000122035 1390 ntBASIC9.53□□□□□ -0.88
Clrn1Q8K445 Diexf-201ENSMUST00000085555 5570 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Clrn1Q8K445 Rasgrp1-204ENSMUST00000173252 1750 ntTSL 5 BASIC9.53□□□□□ -0.88
Clrn1Q8K445 4930480K15Rik-201ENSMUST00000162121 2199 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Clrn1Q8K445 Gm39312-201ENSMUST00000213586 2195 ntTSL 5 BASIC9.53□□□□□ -0.88
Clrn1Q8K445 Kirrel3-205ENSMUST00000187182 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Clrn1Q8K445 Pml-201ENSMUST00000085673 4481 ntAPPRIS P4 TSL 1 (best) BASIC9.53□□□□□ -0.88
Clrn1Q8K445 0610030E20Rik-201ENSMUST00000077783 4605 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Clrn1Q8K445 Gm8019-201ENSMUST00000119317 587 ntBASIC9.53□□□□□ -0.88
Clrn1Q8K445 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC9.53□□□□□ -0.88
Clrn1Q8K445 Myl6-201ENSMUST00000164181 665 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Clrn1Q8K445 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC9.53□□□□□ -0.88
Clrn1Q8K445 Gm9146-201ENSMUST00000182254 1006 ntBASIC9.53□□□□□ -0.88
Clrn1Q8K445 Rian-213ENSMUST00000182981 1219 ntTSL 5 BASIC9.53□□□□□ -0.88
Clrn1Q8K445 1810018F18Rik-201ENSMUST00000188253 277 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Clrn1Q8K445 Gm44388-201ENSMUST00000204350 258 ntBASIC9.53□□□□□ -0.88
Clrn1Q8K445 AC139155.1-201ENSMUST00000226043 444 ntBASIC9.53□□□□□ -0.88
Clrn1Q8K445 Ssna1-201ENSMUST00000028342 862 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Clrn1Q8K445 Crip1-201ENSMUST00000006523 445 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Clrn1Q8K445 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Clrn1Q8K445 Vmn1r199-201ENSMUST00000091732 1104 ntAPPRIS P2 BASIC9.53□□□□□ -0.88
Clrn1Q8K445 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Clrn1Q8K445 Hnrnpk-216ENSMUST00000177019 2626 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Clrn1Q8K445 Pfkp-207ENSMUST00000138703 4145 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Clrn1Q8K445 Sgo2b-201ENSMUST00000179944 3739 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Clrn1Q8K445 Apobec3-205ENSMUST00000175752 1977 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Clrn1Q8K445 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Clrn1Q8K445 Gm28268-201ENSMUST00000188966 2528 ntTSL 5 BASIC9.53□□□□□ -0.88
Clrn1Q8K445 Gm37036-201ENSMUST00000192836 2506 ntBASIC9.53□□□□□ -0.88
Clrn1Q8K445 Serpina1e-202ENSMUST00000122229 1575 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Clrn1Q8K445 Gm42849-201ENSMUST00000202834 1584 ntTSL 5 BASIC9.53□□□□□ -0.88
Clrn1Q8K445 CT009713.3-201ENSMUST00000224987 1565 ntBASIC9.53□□□□□ -0.88
Clrn1Q8K445 9530026P05Rik-201ENSMUST00000181121 2142 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Clrn1Q8K445 Fam122b-201ENSMUST00000071023 4334 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Clrn1Q8K445 Ldlr-201ENSMUST00000034713 4627 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Clrn1Q8K445 Mtbp-201ENSMUST00000022998 3144 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Clrn1Q8K445 Exoc7-203ENSMUST00000106413 3298 ntAPPRIS ALT1 TSL 5 BASIC9.53□□□□□ -0.88
Clrn1Q8K445 Aebp2-201ENSMUST00000032359 5932 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Clrn1Q8K445 Ctsll3-201ENSMUST00000043754 1337 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Clrn1Q8K445 Pcdh11x-202ENSMUST00000113358 8607 ntAPPRIS P2 TSL 5 BASIC9.53□□□□□ -0.88
Clrn1Q8K445 Galntl5-202ENSMUST00000114965 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Clrn1Q8K445 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Clrn1Q8K445 Exosc1-201ENSMUST00000075280 1622 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Clrn1Q8K445 Lhx9-202ENSMUST00000046870 3645 ntAPPRIS ALT1 TSL 5 BASIC9.52□□□□□ -0.88
Clrn1Q8K445 Gm10857-201ENSMUST00000195343 2794 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
Clrn1Q8K445 Acsm2-201ENSMUST00000084647 2051 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
Clrn1Q8K445 Arhgap10-203ENSMUST00000210922 2208 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
Clrn1Q8K445 4930589L23Rik-201ENSMUST00000091023 1364 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
Clrn1Q8K445 Tiam2-202ENSMUST00000169838 5725 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Clrn1Q8K445 Sec22c-201ENSMUST00000078547 5713 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Clrn1Q8K445 Gm7357-201ENSMUST00000195361 2991 ntBASIC9.52□□□□□ -0.88
Clrn1Q8K445 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.88
Clrn1Q8K445 Plekhb2-203ENSMUST00000156687 5176 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Clrn1Q8K445 CAAA01216754.1-201ENSMUST00000215882 1836 ntBASIC9.52□□□□□ -0.89
Clrn1Q8K445 Tia1-202ENSMUST00000095753 4477 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Clrn1Q8K445 Glyctk-201ENSMUST00000036382 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Clrn1Q8K445 Mlh3-202ENSMUST00000166821 5420 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms