Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 4933428C19Rik-201ENSMUST00000146043 818 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Cdx2P43241 Gm11959-201ENSMUST00000148655 723 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Cdx2P43241 Gm23820-201ENSMUST00000158450 300 ntBASIC9.65□□□□□ -0.86
Cdx2P43241 Gm15641-201ENSMUST00000161407 670 ntTSL 3 BASIC9.65□□□□□ -0.86
Cdx2P43241 Gm3752-202ENSMUST00000167833 450 ntTSL 5 BASIC9.65□□□□□ -0.86
Cdx2P43241 Gm10128-201ENSMUST00000171360 615 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Cdx2P43241 Gm2956-202ENSMUST00000178722 450 ntTSL 5 BASIC9.65□□□□□ -0.86
Cdx2P43241 Gm8907-201ENSMUST00000182240 1003 ntBASIC9.65□□□□□ -0.86
Cdx2P43241 Gm8391-201ENSMUST00000185632 726 ntBASIC9.65□□□□□ -0.86
Cdx2P43241 Gm10340-202ENSMUST00000188235 615 ntTSL 5 BASIC9.65□□□□□ -0.86
Cdx2P43241 5031425E22Rik-203ENSMUST00000188328 828 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Cdx2P43241 Tmem89-202ENSMUST00000192852 945 ntBASIC9.65□□□□□ -0.86
Cdx2P43241 Ucma-205ENSMUST00000195688 554 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Cdx2P43241 Gm5788-201ENSMUST00000220499 435 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Cdx2P43241 CT030664.1-201ENSMUST00000223639 908 ntBASIC9.65□□□□□ -0.86
Cdx2P43241 Gm6960-201ENSMUST00000051629 639 ntBASIC9.65□□□□□ -0.86
Cdx2P43241 Cenph-201ENSMUST00000075550 1251 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cdx2P43241 Elobl-202ENSMUST00000082339 300 ntBASIC9.65□□□□□ -0.86
Cdx2P43241 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.86
Cdx2P43241 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Cdx2P43241 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Cdx2P43241 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Cdx2P43241 4930570G19Rik-201ENSMUST00000139363 3112 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Cdx2P43241 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Cdx2P43241 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Cdx2P43241 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cdx2P43241 Stox2-206ENSMUST00000210030 2734 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Cdx2P43241 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cdx2P43241 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Cdx2P43241 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.87
Cdx2P43241 AC153566.1-201ENSMUST00000216441 2057 ntBASIC9.65□□□□□ -0.87
Cdx2P43241 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Cdx2P43241 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.87
Cdx2P43241 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Cdx2P43241 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.87
Cdx2P43241 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Cdx2P43241 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Cdx2P43241 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Cdx2P43241 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Cdx2P43241 Gm10603-201ENSMUST00000183512 2279 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Cdx2P43241 Ep400-210ENSMUST00000146458 3673 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Cdx2P43241 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cdx2P43241 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cdx2P43241 Prr13-205ENSMUST00000171245 1353 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cdx2P43241 Acsm5-205ENSMUST00000207440 2494 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cdx2P43241 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cdx2P43241 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cdx2P43241 Ndrg4-202ENSMUST00000073139 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cdx2P43241 Arhgef9-204ENSMUST00000113882 2445 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Cdx2P43241 Cckar-202ENSMUST00000200691 3230 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Cdx2P43241 Dcaf11-206ENSMUST00000128490 2660 ntAPPRIS P2 TSL 2 BASIC9.64□□□□□ -0.87
Cdx2P43241 Gm44510-201ENSMUST00000206288 4532 ntBASIC9.64□□□□□ -0.87
Cdx2P43241 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cdx2P43241 BC043934-202ENSMUST00000185694 2356 ntBASIC9.64□□□□□ -0.87
Cdx2P43241 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Cdx2P43241 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cdx2P43241 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Cdx2P43241 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cdx2P43241 A930007I19Rik-201ENSMUST00000180737 2319 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Cdx2P43241 Deup1-201ENSMUST00000045513 2583 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Cdx2P43241 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Cdx2P43241 Rasgrp4-201ENSMUST00000032811 4621 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cdx2P43241 Rasgrp4-202ENSMUST00000094617 4617 ntTSL 5 BASIC9.64□□□□□ -0.87
Cdx2P43241 Mrps18b-202ENSMUST00000113782 803 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Cdx2P43241 Gm12004-201ENSMUST00000117869 718 ntBASIC9.64□□□□□ -0.87
Cdx2P43241 Gm12529-201ENSMUST00000119529 268 ntBASIC9.64□□□□□ -0.87
Cdx2P43241 4921508D12Rik-201ENSMUST00000124095 1075 ntTSL 2 BASIC9.64□□□□□ -0.87
Cdx2P43241 Gstm1-202ENSMUST00000126593 828 ntTSL 3 BASIC9.64□□□□□ -0.87
Cdx2P43241 Cdrt4os1-202ENSMUST00000153180 1109 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Cdx2P43241 Gm23899-201ENSMUST00000158112 90 ntBASIC9.64□□□□□ -0.87
Cdx2P43241 Cd209b-203ENSMUST00000171635 1000 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cdx2P43241 Gm20924-201ENSMUST00000177663 684 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Cdx2P43241 Gm20816-201ENSMUST00000177765 684 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Cdx2P43241 Gm20825-201ENSMUST00000178149 1226 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cdx2P43241 Gm20909-201ENSMUST00000178234 684 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Cdx2P43241 Gm20825-202ENSMUST00000178396 684 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Cdx2P43241 Gm20852-201ENSMUST00000178761 684 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Cdx2P43241 Gm20854-201ENSMUST00000178889 1002 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Cdx2P43241 Gm20867-201ENSMUST00000178900 684 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Cdx2P43241 Gm21443-201ENSMUST00000179070 696 ntBASIC9.64□□□□□ -0.87
Cdx2P43241 Gm20747-201ENSMUST00000179137 684 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Cdx2P43241 Gm21394-201ENSMUST00000179523 684 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Cdx2P43241 Gm21783-201ENSMUST00000179570 684 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Cdx2P43241 Gm21812-201ENSMUST00000179590 684 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Cdx2P43241 Gm21721-201ENSMUST00000179595 684 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Cdx2P43241 Gm20809-201ENSMUST00000179663 684 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Cdx2P43241 Gm21118-201ENSMUST00000180179 684 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Cdx2P43241 Gm20806-201ENSMUST00000180324 684 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Cdx2P43241 2900076A07Rik-201ENSMUST00000180385 914 ntTSL 3 BASIC9.64□□□□□ -0.87
Cdx2P43241 Gm20909-202ENSMUST00000181205 1223 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cdx2P43241 Gm20907-201ENSMUST00000185201 693 ntBASIC9.64□□□□□ -0.87
Cdx2P43241 Gm20919-201ENSMUST00000185282 696 ntBASIC9.64□□□□□ -0.87
Cdx2P43241 Gm21785-201ENSMUST00000185440 696 ntBASIC9.64□□□□□ -0.87
Cdx2P43241 Gm21808-201ENSMUST00000185495 696 ntBASIC9.64□□□□□ -0.87
Cdx2P43241 Gm20898-201ENSMUST00000185598 693 ntBASIC9.64□□□□□ -0.87
Cdx2P43241 Gm20800-201ENSMUST00000185634 693 ntBASIC9.64□□□□□ -0.87
Cdx2P43241 Gm20902-201ENSMUST00000185643 696 ntBASIC9.64□□□□□ -0.87
Cdx2P43241 Gm21268-201ENSMUST00000185646 696 ntBASIC9.64□□□□□ -0.87
Cdx2P43241 Gm21257-201ENSMUST00000185655 696 ntBASIC9.64□□□□□ -0.87
Cdx2P43241 Gm21733-201ENSMUST00000185670 696 ntBASIC9.64□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms