Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Vps54Q5SPW0 Sgca-201ENSMUST00000100551 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps54Q5SPW0 Mcm5-205ENSMUST00000212811 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps54Q5SPW0 Napepld-202ENSMUST00000115217 3954 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps54Q5SPW0 Cass4-204ENSMUST00000228775 2629 ntAPPRIS ALT2 BASIC12.14□□□□□ -0.47
Vps54Q5SPW0 Hmox1-201ENSMUST00000005548 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps54Q5SPW0 Gcc1-201ENSMUST00000064377 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps54Q5SPW0 Unc45a-202ENSMUST00000107368 3635 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Vps54Q5SPW0 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC12.14□□□□□ -0.47
Vps54Q5SPW0 9530056K15Rik-201ENSMUST00000061947 2315 ntBASIC12.14□□□□□ -0.47
Vps54Q5SPW0 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps54Q5SPW0 Gabrr3-201ENSMUST00000114341 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps54Q5SPW0 Xrcc5-201ENSMUST00000027379 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps54Q5SPW0 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Vps54Q5SPW0 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps54Q5SPW0 Mir598-201ENSMUST00000102094 79 ntBASIC12.14□□□□□ -0.47
Vps54Q5SPW0 Rhox2-ps-201ENSMUST00000117421 322 ntBASIC12.14□□□□□ -0.47
Vps54Q5SPW0 Gm9166-201ENSMUST00000120293 561 ntBASIC12.14□□□□□ -0.47
Vps54Q5SPW0 Gm6881-201ENSMUST00000121811 833 ntBASIC12.14□□□□□ -0.47
Vps54Q5SPW0 Smt3h2-ps2-201ENSMUST00000122370 288 ntBASIC12.14□□□□□ -0.47
Vps54Q5SPW0 Gm12221-201ENSMUST00000125096 1131 ntBASIC12.14□□□□□ -0.47
Vps54Q5SPW0 Gm3298-202ENSMUST00000172110 615 ntTSL 5 BASIC12.14□□□□□ -0.47
Vps54Q5SPW0 Gm19668-201ENSMUST00000178581 747 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Vps54Q5SPW0 Gm19412-201ENSMUST00000185388 436 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Vps54Q5SPW0 Gm17796-201ENSMUST00000189015 1213 ntBASIC12.14□□□□□ -0.47
Vps54Q5SPW0 Gm29918-201ENSMUST00000205635 138 ntTSL 5 BASIC12.14□□□□□ -0.47
Vps54Q5SPW0 Gm7594-201ENSMUST00000218595 871 ntBASIC12.14□□□□□ -0.47
Vps54Q5SPW0 Gm2696-201ENSMUST00000220062 723 ntAPPRIS P5 BASIC12.14□□□□□ -0.47
Vps54Q5SPW0 AC122357.1-202ENSMUST00000221436 633 ntTSL 2 BASIC12.14□□□□□ -0.47
Vps54Q5SPW0 Gm18749-201ENSMUST00000222410 692 ntBASIC12.14□□□□□ -0.47
Vps54Q5SPW0 AC127583.1-201ENSMUST00000224351 540 ntBASIC12.14□□□□□ -0.47
Vps54Q5SPW0 Lcn3-201ENSMUST00000028304 684 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps54Q5SPW0 Vmn1r192-201ENSMUST00000072632 1067 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Vps54Q5SPW0 n-R5s25-201ENSMUST00000082923 119 ntBASIC12.14□□□□□ -0.47
Vps54Q5SPW0 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC12.14□□□□□ -0.47
Vps54Q5SPW0 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Vps54Q5SPW0 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps54Q5SPW0 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Vps54Q5SPW0 5830462I19Rik-201ENSMUST00000168137 3383 ntBASIC12.14□□□□□ -0.47
Vps54Q5SPW0 N4bp2l1-205ENSMUST00000202031 1864 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Vps54Q5SPW0 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps54Q5SPW0 Pip5k1a-201ENSMUST00000005768 3480 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Vps54Q5SPW0 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Vps54Q5SPW0 AC159810.1-201ENSMUST00000214838 1480 ntBASIC12.14□□□□□ -0.47
Vps54Q5SPW0 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Vps54Q5SPW0 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Vps54Q5SPW0 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps54Q5SPW0 Prune2-202ENSMUST00000223920 1803 ntBASIC12.14□□□□□ -0.47
Vps54Q5SPW0 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps54Q5SPW0 Gpr149-201ENSMUST00000058535 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps54Q5SPW0 Suclg2-204ENSMUST00000204224 3367 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps54Q5SPW0 Entpd8-202ENSMUST00000114376 1942 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Vps54Q5SPW0 Tex9-214ENSMUST00000184831 1652 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Vps54Q5SPW0 Fam53c-202ENSMUST00000097622 4256 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps54Q5SPW0 Mospd1-201ENSMUST00000023836 1763 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps54Q5SPW0 Mospd1-202ENSMUST00000096447 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps54Q5SPW0 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps54Q5SPW0 Rnf2-201ENSMUST00000076110 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps54Q5SPW0 Gm44070-201ENSMUST00000203389 2220 ntBASIC12.13□□□□□ -0.47
Vps54Q5SPW0 Rab36-207ENSMUST00000147802 3291 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Vps54Q5SPW0 Ahrr-201ENSMUST00000022059 4754 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps54Q5SPW0 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps54Q5SPW0 1700064H15Rik-201ENSMUST00000119133 394 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps54Q5SPW0 Gm15746-201ENSMUST00000120684 1027 ntBASIC12.13□□□□□ -0.47
Vps54Q5SPW0 Gm11736-201ENSMUST00000121468 505 ntBASIC12.13□□□□□ -0.47
Vps54Q5SPW0 Gm13505-201ENSMUST00000121666 817 ntBASIC12.13□□□□□ -0.47
Vps54Q5SPW0 Hnf1aos1-202ENSMUST00000129609 516 ntTSL 2 BASIC12.13□□□□□ -0.47
Vps54Q5SPW0 Zfp961-204ENSMUST00000136516 601 ntTSL 2 BASIC12.13□□□□□ -0.47
Vps54Q5SPW0 Gm3466-201ENSMUST00000181797 1192 ntBASIC12.13□□□□□ -0.47
Vps54Q5SPW0 Gm17797-201ENSMUST00000182175 997 ntBASIC12.13□□□□□ -0.47
Vps54Q5SPW0 Gm29617-201ENSMUST00000185730 610 ntBASIC12.13□□□□□ -0.47
Vps54Q5SPW0 Gm2345-201ENSMUST00000193451 589 ntBASIC12.13□□□□□ -0.47
Vps54Q5SPW0 Gm44131-201ENSMUST00000203036 394 ntBASIC12.13□□□□□ -0.47
Vps54Q5SPW0 Gm5650-201ENSMUST00000209641 598 ntBASIC12.13□□□□□ -0.47
Vps54Q5SPW0 Cyp2e1-203ENSMUST00000210235 1012 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vps54Q5SPW0 Gm34105-201ENSMUST00000214812 571 ntTSL 5 BASIC12.13□□□□□ -0.47
Vps54Q5SPW0 Isca2-206ENSMUST00000222449 374 ntTSL 2 BASIC12.13□□□□□ -0.47
Vps54Q5SPW0 AC118639.1-202ENSMUST00000226957 653 ntBASIC12.13□□□□□ -0.47
Vps54Q5SPW0 AC174647.1-201ENSMUST00000227419 1271 ntBASIC12.13□□□□□ -0.47
Vps54Q5SPW0 Speer4f1-201ENSMUST00000076099 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps54Q5SPW0 Olfr1155-201ENSMUST00000099843 945 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Vps54Q5SPW0 4930570G19Rik-201ENSMUST00000139363 3112 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vps54Q5SPW0 Rasgrp4-201ENSMUST00000032811 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps54Q5SPW0 Rasgrp4-202ENSMUST00000094617 4617 ntTSL 5 BASIC12.13□□□□□ -0.47
Vps54Q5SPW0 AC124577.2-201ENSMUST00000217413 2420 ntBASIC12.13□□□□□ -0.47
Vps54Q5SPW0 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Vps54Q5SPW0 Olfr1491-204ENSMUST00000216366 1726 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Vps54Q5SPW0 Gm10829-201ENSMUST00000202084 2988 ntBASIC12.13□□□□□ -0.47
Vps54Q5SPW0 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Vps54Q5SPW0 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Vps54Q5SPW0 Nfyc-204ENSMUST00000120779 2006 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Vps54Q5SPW0 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps54Q5SPW0 Gm43499-201ENSMUST00000202091 2107 ntBASIC12.13□□□□□ -0.47
Vps54Q5SPW0 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps54Q5SPW0 Gm14164-202ENSMUST00000128577 1999 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vps54Q5SPW0 Snx6-204ENSMUST00000218934 1441 ntTSL 5 BASIC12.12□□□□□ -0.47
Vps54Q5SPW0 Lrrcc1-202ENSMUST00000108370 3359 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps54Q5SPW0 Pus7l-201ENSMUST00000049151 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps54Q5SPW0 Gm43813-201ENSMUST00000196847 2294 ntTSL 5 BASIC12.12□□□□□ -0.47
Vps54Q5SPW0 Xlr3a-201ENSMUST00000074619 1645 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms