Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cdx2P43241 Ndufab1-201ENSMUST00000033157 3479 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cdx2P43241 Gm10463-202ENSMUST00000195772 2889 ntBASIC9.67□□□□□ -0.86
Cdx2P43241 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cdx2P43241 AC125409.1-201ENSMUST00000223213 3370 ntBASIC9.67□□□□□ -0.86
Cdx2P43241 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC9.67□□□□□ -0.86
Cdx2P43241 AA474408-201ENSMUST00000098110 3339 ntBASIC9.67□□□□□ -0.86
Cdx2P43241 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cdx2P43241 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC9.67□□□□□ -0.86
Cdx2P43241 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Cdx2P43241 Chrne-202ENSMUST00000102556 1591 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cdx2P43241 Ccdc120-201ENSMUST00000033490 3658 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cdx2P43241 AC160138.2-201ENSMUST00000220255 1531 ntBASIC9.66□□□□□ -0.86
Cdx2P43241 Aplp2-202ENSMUST00000079758 3504 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Cdx2P43241 Trim36-202ENSMUST00000167364 4543 ntTSL 5 BASIC9.66□□□□□ -0.86
Cdx2P43241 Anxa6-202ENSMUST00000108883 2489 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cdx2P43241 Gm28578-203ENSMUST00000189196 1470 ntTSL 5 BASIC9.66□□□□□ -0.86
Cdx2P43241 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Cdx2P43241 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC9.66□□□□□ -0.86
Cdx2P43241 Pofut1-207ENSMUST00000152390 4833 ntTSL 2 BASIC9.66□□□□□ -0.86
Cdx2P43241 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Cdx2P43241 Gm32072-201ENSMUST00000200803 1434 ntBASIC9.66□□□□□ -0.86
Cdx2P43241 Exoc7-201ENSMUST00000021147 3337 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Cdx2P43241 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Cdx2P43241 Fam184b-201ENSMUST00000016023 4236 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cdx2P43241 Gm38140-201ENSMUST00000193617 2755 ntBASIC9.66□□□□□ -0.86
Cdx2P43241 Gm16214-201ENSMUST00000143710 1388 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Cdx2P43241 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cdx2P43241 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cdx2P43241 Sap130-202ENSMUST00000178164 4030 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Cdx2P43241 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC9.66□□□□□ -0.86
Cdx2P43241 Tph1-202ENSMUST00000107669 1762 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cdx2P43241 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cdx2P43241 Herc6-201ENSMUST00000031817 4767 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cdx2P43241 Gm37660-201ENSMUST00000192754 1732 ntBASIC9.66□□□□□ -0.86
Cdx2P43241 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Cdx2P43241 Gm23061-201ENSMUST00000102348 116 ntBASIC9.66□□□□□ -0.86
Cdx2P43241 Gm14276-201ENSMUST00000117941 720 ntBASIC9.66□□□□□ -0.86
Cdx2P43241 Gm12738-201ENSMUST00000122349 536 ntBASIC9.66□□□□□ -0.86
Cdx2P43241 Gm16365-201ENSMUST00000122987 629 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Cdx2P43241 Gm15579-201ENSMUST00000141299 757 ntTSL 3 BASIC9.66□□□□□ -0.86
Cdx2P43241 Airn-204ENSMUST00000160932 842 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Cdx2P43241 Kcne3-204ENSMUST00000179842 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cdx2P43241 Gm28180-201ENSMUST00000189608 722 ntBASIC9.66□□□□□ -0.86
Cdx2P43241 Gm37065-202ENSMUST00000192000 568 ntTSL 3 BASIC9.66□□□□□ -0.86
Cdx2P43241 Nme6-206ENSMUST00000197627 905 ntTSL 3 BASIC9.66□□□□□ -0.86
Cdx2P43241 Gm7997-201ENSMUST00000210546 980 ntBASIC9.66□□□□□ -0.86
Cdx2P43241 2210039B01Rik-201ENSMUST00000222490 1044 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Cdx2P43241 Figla-201ENSMUST00000032070 759 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cdx2P43241 Mif-201ENSMUST00000038169 544 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cdx2P43241 1700063H04Rik-201ENSMUST00000043553 817 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Cdx2P43241 Smim4-201ENSMUST00000049732 311 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
Cdx2P43241 Olfr403-201ENSMUST00000076675 942 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Cdx2P43241 Olfr43-201ENSMUST00000078936 1092 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Cdx2P43241 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Cdx2P43241 Atxn1l-201ENSMUST00000093162 7526 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
Cdx2P43241 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cdx2P43241 Lep-201ENSMUST00000069789 3259 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cdx2P43241 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cdx2P43241 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cdx2P43241 Prpf18-204ENSMUST00000152362 1579 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cdx2P43241 AC108416.1-201ENSMUST00000228755 1558 ntBASIC9.66□□□□□ -0.86
Cdx2P43241 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cdx2P43241 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cdx2P43241 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Cdx2P43241 Cd1d2-203ENSMUST00000194208 1527 ntAPPRIS P5 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cdx2P43241 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Cdx2P43241 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cdx2P43241 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cdx2P43241 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC9.66□□□□□ -0.86
Cdx2P43241 Birc3-202ENSMUST00000115672 2909 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Cdx2P43241 Gm45496-201ENSMUST00000209918 2917 ntBASIC9.66□□□□□ -0.86
Cdx2P43241 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cdx2P43241 Gm39312-201ENSMUST00000213586 2195 ntTSL 5 BASIC9.65□□□□□ -0.86
Cdx2P43241 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cdx2P43241 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cdx2P43241 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cdx2P43241 Rnf183-202ENSMUST00000107454 1407 ntAPPRIS P1 TSL 3 BASIC9.65□□□□□ -0.86
Cdx2P43241 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cdx2P43241 Acadsb-202ENSMUST00000117518 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cdx2P43241 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cdx2P43241 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cdx2P43241 Tead4-203ENSMUST00000130454 1718 ntTSL 5 BASIC9.65□□□□□ -0.86
Cdx2P43241 Sema3b-203ENSMUST00000102530 3410 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Cdx2P43241 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC9.65□□□□□ -0.86
Cdx2P43241 1700092E19Rik-202ENSMUST00000154703 1650 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Cdx2P43241 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cdx2P43241 9530056K15Rik-201ENSMUST00000061947 2315 ntBASIC9.65□□□□□ -0.86
Cdx2P43241 Klk11-201ENSMUST00000080211 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cdx2P43241 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC9.65□□□□□ -0.86
Cdx2P43241 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Cdx2P43241 Kif2a-206ENSMUST00000159772 2570 ntTSL 5 BASIC9.65□□□□□ -0.86
Cdx2P43241 Crisp4-203ENSMUST00000115344 960 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cdx2P43241 Gm14239-201ENSMUST00000116491 685 ntBASIC9.65□□□□□ -0.86
Cdx2P43241 Gm13397-201ENSMUST00000119562 878 ntBASIC9.65□□□□□ -0.86
Cdx2P43241 Gm12696-201ENSMUST00000122361 905 ntBASIC9.65□□□□□ -0.86
Cdx2P43241 Rps9-205ENSMUST00000126562 896 ntTSL 2 BASIC9.65□□□□□ -0.86
Cdx2P43241 1700019E08Rik-201ENSMUST00000134308 424 ntTSL 5 BASIC9.65□□□□□ -0.86
Cdx2P43241 Naa38-204ENSMUST00000144531 671 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cdx2P43241 Gm16033-201ENSMUST00000144915 596 ntTSL 5 BASIC9.65□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms