Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Fam161b-202ENSMUST00000065536 3000 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd1lQ9CXF7 Bpifb1-201ENSMUST00000028987 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd1lQ9CXF7 Lpl-201ENSMUST00000015712 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd1lQ9CXF7 Lpin3-201ENSMUST00000040872 3458 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd1lQ9CXF7 Slc5a9-203ENSMUST00000102721 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd1lQ9CXF7 Prpf6-201ENSMUST00000002529 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd1lQ9CXF7 Pakap-203ENSMUST00000150412 5163 ntAPPRIS P5 TSL 5 BASIC11.34□□□□□ -0.59
Chd1lQ9CXF7 Olfr173-202ENSMUST00000206205 2778 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.59
Chd1lQ9CXF7 4632411P08Rik-201ENSMUST00000181005 3237 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
Chd1lQ9CXF7 Ano1-203ENSMUST00000121758 4552 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd1lQ9CXF7 Plec-206ENSMUST00000074834 14855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd1lQ9CXF7 Fhod1-201ENSMUST00000014922 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd1lQ9CXF7 Epb41l3-215ENSMUST00000225977 3188 ntAPPRIS ALT2 BASIC11.33□□□□□ -0.6
Chd1lQ9CXF7 Gm28405-201ENSMUST00000185222 1498 ntTSL 5 BASIC11.33□□□□□ -0.6
Chd1lQ9CXF7 Gm29255-201ENSMUST00000185248 1498 ntTSL 5 BASIC11.33□□□□□ -0.6
Chd1lQ9CXF7 Gm29421-201ENSMUST00000185843 1498 ntTSL 5 BASIC11.33□□□□□ -0.6
Chd1lQ9CXF7 Gm29108-201ENSMUST00000186020 1498 ntTSL 5 BASIC11.33□□□□□ -0.6
Chd1lQ9CXF7 Gm29248-201ENSMUST00000186074 1498 ntTSL 5 BASIC11.33□□□□□ -0.6
Chd1lQ9CXF7 Gm28207-202ENSMUST00000187419 1498 ntTSL 5 BASIC11.33□□□□□ -0.6
Chd1lQ9CXF7 Gm28365-202ENSMUST00000189584 1498 ntTSL 5 BASIC11.33□□□□□ -0.6
Chd1lQ9CXF7 Gm29117-202ENSMUST00000190374 1498 ntTSL 5 BASIC11.33□□□□□ -0.6
Chd1lQ9CXF7 Arpp19-209ENSMUST00000169492 3963 ntTSL 2 BASIC11.33□□□□□ -0.6
Chd1lQ9CXF7 Prrg3-201ENSMUST00000048790 5931 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd1lQ9CXF7 Zfp42-203ENSMUST00000211248 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd1lQ9CXF7 Papolg-202ENSMUST00000102863 2171 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Chd1lQ9CXF7 Pdpr-201ENSMUST00000039333 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd1lQ9CXF7 Hdac7-204ENSMUST00000116409 4113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd1lQ9CXF7 Stam2-201ENSMUST00000102759 4717 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd1lQ9CXF7 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Chd1lQ9CXF7 Gm12274-201ENSMUST00000120062 385 ntBASIC11.33□□□□□ -0.6
Chd1lQ9CXF7 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Chd1lQ9CXF7 Ubl5-203ENSMUST00000160124 501 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Chd1lQ9CXF7 5730420D15Rik-201ENSMUST00000181781 1182 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Chd1lQ9CXF7 Gm20781-201ENSMUST00000193154 693 ntBASIC11.33□□□□□ -0.6
Chd1lQ9CXF7 Gm21736-201ENSMUST00000195399 693 ntBASIC11.33□□□□□ -0.6
Chd1lQ9CXF7 Gm42655-201ENSMUST00000202782 1134 ntBASIC11.33□□□□□ -0.6
Chd1lQ9CXF7 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC11.33□□□□□ -0.6
Chd1lQ9CXF7 AC159819.2-201ENSMUST00000216151 342 ntBASIC11.33□□□□□ -0.6
Chd1lQ9CXF7 Gm4811-201ENSMUST00000220879 1220 ntBASIC11.33□□□□□ -0.6
Chd1lQ9CXF7 1700047G03Rik-205ENSMUST00000227822 1048 ntBASIC11.33□□□□□ -0.6
Chd1lQ9CXF7 Gm25973-201ENSMUST00000083717 127 ntBASIC11.33□□□□□ -0.6
Chd1lQ9CXF7 Cep57-203ENSMUST00000124883 1643 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Chd1lQ9CXF7 Firre-206ENSMUST00000203933 5555 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Chd1lQ9CXF7 Trim17-202ENSMUST00000075141 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd1lQ9CXF7 Bcl9-207ENSMUST00000166341 4652 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd1lQ9CXF7 Ces2b-201ENSMUST00000059449 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd1lQ9CXF7 Slc7a9-203ENSMUST00000118969 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd1lQ9CXF7 St6galnac2-206ENSMUST00000144398 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd1lQ9CXF7 Ppip5k1-203ENSMUST00000110626 5171 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Chd1lQ9CXF7 G6pc-201ENSMUST00000019469 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd1lQ9CXF7 Sf3a3-201ENSMUST00000030734 1820 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chd1lQ9CXF7 Pm20d1-201ENSMUST00000048660 2305 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chd1lQ9CXF7 Gm43481-201ENSMUST00000201715 3672 ntBASIC11.32□□□□□ -0.6
Chd1lQ9CXF7 Dync1i2-206ENSMUST00000112140 2573 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
Chd1lQ9CXF7 Tec-202ENSMUST00000073843 2573 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Chd1lQ9CXF7 Gm6225-201ENSMUST00000181558 1700 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Chd1lQ9CXF7 Crispld1-201ENSMUST00000095075 4472 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chd1lQ9CXF7 Pkd2l2-202ENSMUST00000166156 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chd1lQ9CXF7 Lin7a-201ENSMUST00000020057 2363 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chd1lQ9CXF7 AC022682.1-201ENSMUST00000224624 2023 ntBASIC11.32□□□□□ -0.6
Chd1lQ9CXF7 Isx-201ENSMUST00000034034 1793 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chd1lQ9CXF7 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Chd1lQ9CXF7 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Chd1lQ9CXF7 4930505M18Rik-201ENSMUST00000175854 1288 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Chd1lQ9CXF7 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chd1lQ9CXF7 Gm26976-201ENSMUST00000182929 908 ntBASIC11.32□□□□□ -0.6
Chd1lQ9CXF7 Gm42493-201ENSMUST00000197559 1121 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Chd1lQ9CXF7 Fcer2a-205ENSMUST00000208145 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chd1lQ9CXF7 AC102523.2-201ENSMUST00000227813 983 ntBASIC11.32□□□□□ -0.6
Chd1lQ9CXF7 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Chd1lQ9CXF7 Tmem63a-201ENSMUST00000027800 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chd1lQ9CXF7 Hdac9-208ENSMUST00000211107 1683 ntTSL 5 BASIC11.32□□□□□ -0.6
Chd1lQ9CXF7 Wdr61-202ENSMUST00000118771 3372 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Chd1lQ9CXF7 Lif-201ENSMUST00000040750 3798 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Chd1lQ9CXF7 Gm19409-201ENSMUST00000198244 2858 ntBASIC11.32□□□□□ -0.6
Chd1lQ9CXF7 Slco1b2-204ENSMUST00000203597 1965 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Chd1lQ9CXF7 Il20rb-201ENSMUST00000098458 2793 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Chd1lQ9CXF7 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Chd1lQ9CXF7 Gm31763-202ENSMUST00000218205 1724 ntBASIC11.32□□□□□ -0.6
Chd1lQ9CXF7 AC131081.1-201ENSMUST00000219535 1736 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Chd1lQ9CXF7 Sag-201ENSMUST00000077772 1719 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chd1lQ9CXF7 Siglech-201ENSMUST00000060416 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chd1lQ9CXF7 Ank1-205ENSMUST00000117296 6794 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chd1lQ9CXF7 Art4-201ENSMUST00000032341 2517 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chd1lQ9CXF7 Treml2-201ENSMUST00000170941 4509 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chd1lQ9CXF7 Gm38910-201ENSMUST00000204630 2448 ntBASIC11.31□□□□□ -0.6
Chd1lQ9CXF7 Zdbf2-201ENSMUST00000029025 12112 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chd1lQ9CXF7 Commd2-202ENSMUST00000160959 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chd1lQ9CXF7 Copa-206ENSMUST00000135192 4622 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chd1lQ9CXF7 Ptprm-201ENSMUST00000037974 5186 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chd1lQ9CXF7 Gm3294-201ENSMUST00000164104 7367 ntTSL 3 BASIC11.31□□□□□ -0.6
Chd1lQ9CXF7 Heatr6-201ENSMUST00000001002 5614 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chd1lQ9CXF7 Entpd8-202ENSMUST00000114376 1942 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Chd1lQ9CXF7 Gm12912-201ENSMUST00000121596 1381 ntBASIC11.31□□□□□ -0.6
Chd1lQ9CXF7 Usp28-203ENSMUST00000213874 4109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chd1lQ9CXF7 Ccdc186-202ENSMUST00000118592 6445 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Chd1lQ9CXF7 Lyn-202ENSMUST00000103010 3387 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chd1lQ9CXF7 Plxdc2-201ENSMUST00000028081 6947 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chd1lQ9CXF7 Nav2-204ENSMUST00000183659 7765 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Chd1lQ9CXF7 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms