Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Clrn1Q8K445 Gm45728-201ENSMUST00000211475 2979 ntBASIC9.6□□□□□ -0.87
Clrn1Q8K445 Gm3318-201ENSMUST00000217604 1183 ntBASIC9.6□□□□□ -0.87
Clrn1Q8K445 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC9.6□□□□□ -0.87
Clrn1Q8K445 Gm43305-202ENSMUST00000225083 705 ntBASIC9.6□□□□□ -0.87
Clrn1Q8K445 Pla2g5-201ENSMUST00000030524 2131 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Clrn1Q8K445 Ifitm7-202ENSMUST00000178021 1823 ntAPPRIS ALT2 BASIC9.6□□□□□ -0.87
Clrn1Q8K445 Ms4a6b-201ENSMUST00000025580 1687 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Clrn1Q8K445 Gm44115-201ENSMUST00000203917 2069 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Clrn1Q8K445 Mapk1ip1-202ENSMUST00000118810 1350 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Clrn1Q8K445 AC154197.1-201ENSMUST00000225136 1382 ntBASIC9.6□□□□□ -0.87
Clrn1Q8K445 Cacna1d-207ENSMUST00000224198 6564 ntAPPRIS ALT2 BASIC9.6□□□□□ -0.87
Clrn1Q8K445 Mettl8-204ENSMUST00000112186 2347 ntAPPRIS P2 TSL 2 BASIC9.6□□□□□ -0.87
Clrn1Q8K445 Casp14-201ENSMUST00000005488 2336 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Clrn1Q8K445 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Clrn1Q8K445 Timm10b-203ENSMUST00000106783 3273 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Clrn1Q8K445 Galnt16-206ENSMUST00000219993 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Clrn1Q8K445 Platr4-203ENSMUST00000199155 2161 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Clrn1Q8K445 Zfp264-202ENSMUST00000208781 2801 ntTSL 5 BASIC9.6□□□□□ -0.87
Clrn1Q8K445 Aox2-201ENSMUST00000114366 5771 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Clrn1Q8K445 Stk26-201ENSMUST00000033444 3639 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Clrn1Q8K445 Fam187b-201ENSMUST00000058093 1485 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Clrn1Q8K445 Pcdh15-221ENSMUST00000146682 1891 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Clrn1Q8K445 N4bp2l1-205ENSMUST00000202031 1864 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Clrn1Q8K445 Hinfp-205ENSMUST00000216508 5333 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Clrn1Q8K445 Nlgn1-205ENSMUST00000193603 11807 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Clrn1Q8K445 Trim9-211ENSMUST00000223160 3574 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Clrn1Q8K445 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Clrn1Q8K445 Usp4-209ENSMUST00000194959 3436 ntAPPRIS ALT1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Clrn1Q8K445 Supt20-ps-201ENSMUST00000117999 1560 ntBASIC9.59□□□□□ -0.87
Clrn1Q8K445 Gm42450-201ENSMUST00000199286 2644 ntTSL 5 BASIC9.59□□□□□ -0.87
Clrn1Q8K445 Pde9a-206ENSMUST00000134525 1818 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Clrn1Q8K445 Kat6b-207ENSMUST00000182855 6791 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Clrn1Q8K445 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC9.59□□□□□ -0.87
Clrn1Q8K445 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Clrn1Q8K445 Rnpc3-201ENSMUST00000092154 3888 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Clrn1Q8K445 AC117245.3-201ENSMUST00000217495 2176 ntBASIC9.59□□□□□ -0.87
Clrn1Q8K445 Mapk8-202ENSMUST00000111942 927 ntTSL 5 BASIC9.59□□□□□ -0.87
Clrn1Q8K445 Meig1-202ENSMUST00000115081 421 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Clrn1Q8K445 1810058I24Rik-201ENSMUST00000130875 690 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Clrn1Q8K445 Gm13031-201ENSMUST00000140501 924 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Clrn1Q8K445 Gm20455-201ENSMUST00000174100 1138 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Clrn1Q8K445 Gm22662-201ENSMUST00000175290 256 ntBASIC9.59□□□□□ -0.87
Clrn1Q8K445 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Clrn1Q8K445 Gm28179-201ENSMUST00000188365 613 ntBASIC9.59□□□□□ -0.87
Clrn1Q8K445 Gm28079-206ENSMUST00000188554 1170 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Clrn1Q8K445 Gm21149-201ENSMUST00000197995 1212 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Clrn1Q8K445 Gm43936-201ENSMUST00000203987 490 ntTSL 5 BASIC9.59□□□□□ -0.87
Clrn1Q8K445 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC9.59□□□□□ -0.87
Clrn1Q8K445 AC154634.3-201ENSMUST00000224589 736 ntBASIC9.59□□□□□ -0.87
Clrn1Q8K445 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Clrn1Q8K445 Rnf2-201ENSMUST00000076110 3160 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Clrn1Q8K445 Slc17a3-203ENSMUST00000110422 1764 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Clrn1Q8K445 Slc7a9-203ENSMUST00000118969 1765 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Clrn1Q8K445 Tdp1-201ENSMUST00000021594 2019 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Clrn1Q8K445 Nrf1-203ENSMUST00000069831 1625 ntTSL 5 BASIC9.59□□□□□ -0.87
Clrn1Q8K445 Nod2-201ENSMUST00000054324 4719 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Clrn1Q8K445 Synpo2-202ENSMUST00000106426 7063 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Clrn1Q8K445 Sptan1-205ENSMUST00000113719 8018 ntTSL 5 BASIC9.59□□□□□ -0.87
Clrn1Q8K445 Nlrc5-202ENSMUST00000098489 1721 ntTSL 5 BASIC9.59□□□□□ -0.87
Clrn1Q8K445 Pex5-203ENSMUST00000112530 3051 ntTSL 5 BASIC9.59□□□□□ -0.87
Clrn1Q8K445 Ispd-206ENSMUST00000223068 2808 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Clrn1Q8K445 Ssb-206ENSMUST00000166411 2088 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Clrn1Q8K445 Smarcc2-203ENSMUST00000105235 4032 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Clrn1Q8K445 Pik3r3-202ENSMUST00000106490 1830 ntTSL 5 BASIC9.59□□□□□ -0.88
Clrn1Q8K445 Dph5-202ENSMUST00000106505 1836 ntTSL 1 (best) BASIC9.59□□□□□ -0.88
Clrn1Q8K445 Sf3a3-201ENSMUST00000030734 1820 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.88
Clrn1Q8K445 Ptpn7-201ENSMUST00000049449 3261 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Clrn1Q8K445 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Clrn1Q8K445 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Clrn1Q8K445 Pkd1l2-202ENSMUST00000109093 7389 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Clrn1Q8K445 Pkd1l2-201ENSMUST00000098375 7386 ntAPPRIS P2 TSL 5 BASIC9.58□□□□□ -0.88
Clrn1Q8K445 Gm37806-201ENSMUST00000194524 6387 ntBASIC9.58□□□□□ -0.88
Clrn1Q8K445 Setd7-201ENSMUST00000037141 7411 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Clrn1Q8K445 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Clrn1Q8K445 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Clrn1Q8K445 Gm43307-201ENSMUST00000199465 2371 ntBASIC9.58□□□□□ -0.88
Clrn1Q8K445 Klf10-203ENSMUST00000227920 2144 ntBASIC9.58□□□□□ -0.88
Clrn1Q8K445 Doxl2-203ENSMUST00000184917 2468 ntAPPRIS P1 TSL 3 BASIC9.58□□□□□ -0.88
Clrn1Q8K445 Ribc1-201ENSMUST00000026288 1508 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Clrn1Q8K445 Ehmt1-210ENSMUST00000147147 5953 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Clrn1Q8K445 Elmo1-201ENSMUST00000072519 5464 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Clrn1Q8K445 CT025639.2-202ENSMUST00000225298 1630 ntBASIC9.58□□□□□ -0.88
Clrn1Q8K445 P2rx7-201ENSMUST00000031425 1605 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Clrn1Q8K445 Gm22751-201ENSMUST00000102077 109 ntBASIC9.58□□□□□ -0.88
Clrn1Q8K445 Mir692-3-201ENSMUST00000102079 109 ntBASIC9.58□□□□□ -0.88
Clrn1Q8K445 Mir692-2-201ENSMUST00000102081 109 ntBASIC9.58□□□□□ -0.88
Clrn1Q8K445 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Clrn1Q8K445 Guca2b-202ENSMUST00000106309 697 ntAPPRIS ALT2 TSL 3 BASIC9.58□□□□□ -0.88
Clrn1Q8K445 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC9.58□□□□□ -0.88
Clrn1Q8K445 Gm12969-201ENSMUST00000120199 1004 ntBASIC9.58□□□□□ -0.88
Clrn1Q8K445 Gm15258-201ENSMUST00000153801 741 ntBASIC9.58□□□□□ -0.88
Clrn1Q8K445 Gm15641-201ENSMUST00000161407 670 ntTSL 3 BASIC9.58□□□□□ -0.88
Clrn1Q8K445 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC9.58□□□□□ -0.88
Clrn1Q8K445 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC9.58□□□□□ -0.88
Clrn1Q8K445 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC9.58□□□□□ -0.88
Clrn1Q8K445 Gm7445-201ENSMUST00000192115 340 ntBASIC9.58□□□□□ -0.88
Clrn1Q8K445 Gm37944-201ENSMUST00000194233 414 ntBASIC9.58□□□□□ -0.88
Clrn1Q8K445 Gm18010-201ENSMUST00000203553 202 ntBASIC9.58□□□□□ -0.88
Clrn1Q8K445 Gm45574-201ENSMUST00000210921 331 ntBASIC9.58□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 86.8 ms